Evidence map›Paper›PMID 30499773›Full record

ArticleeLife2018

Rejection of immunogenic tumor clones is limited by clonal fraction.

Ron S Gejman, Aaron Y Chang, Heather F Jones, Krysta DiKun, Abraham Ari Hakimi, Andrea Schietinger, David A Scheinberg

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 131 citations in OpenAlex.

  1. Article
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  7. CD8 co-receptor modulates the specificity profile of the 1G4 TCR against NY-ESO-1.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
  8. Review
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  10. Top-Down Coercive Mechanisms and the Major Transitions in Evolution.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  11. Modeling combination chemo-immunotherapy for heterogeneous tumors.Quantitative biology (Beijing, China) · 2025
    Article
  12. Article
  13. Review
  14. Review
  15. Article
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  17. Article
  18. Article
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23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ron S Gejman *Tri-Institutional MD-PhD Program, Memorial Sloan-Kettering Cancer Center, Rockefeller University, Weill Cornell Medical College, New York, United States.ORCID 0000-0001-5138-2772
Aaron Y Chang *Weill Cornell Medicine, New York, United States.ORCID 0000-0002-7770-7405
Heather F JonesWeill Cornell Medicine, New York, United States.ORCID 0000-0002-9459-377X
Krysta DiKunWeill Cornell Medicine, New York, United States.
Abraham Ari HakimiDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, United States.ORCID 0000-0002-0930-8824
Andrea SchietingerWeill Cornell Medicine, New York, United States.
David A ScheinbergWeill Cornell Medicine, New York, United States.ORCID 0000-0002-4160-923X
Memorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
T LYMPHOCYTE SUBSET FUNCTION POST-TRANSPLANTATIONP01CA023766 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SCHEINBERG, DAVID A · 1985 to 2023
$59.0M
Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
CANCER PHARMACOLOGYT32CA062948 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI LORRAINE J GUDAS · 1994 to 2026
$12.1M
Understanding and Mimicking TCR Recognition with Therapeutic Monoclonal Antibodies.R35CA241894 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI DAVID A SCHEINBERG · 2020 to 2026
$7.2M
RECOMBINANT ANTICD33 ANTIBODY FOR AMLR01CA055349 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SCHEINBERG, DAVID A · 1991 to 2020
$6.8M
Spatiotemporal regulation of T cell fate decisions in cancerDP2CA225212 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI SCHIETINGER, ANDREA · 2017 to 2017
$2.6M
Immunoediting in Human CancerF30CA200327 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI GEJMAN, RON S · 2015 to 2018
$187k
NCI NIH HHS Core Grant P30 CA008748NCI NIH HHS DP2 CA225212NCI NIH HHS F30 CA200327NCI NIH HHS P01 CA023766NCI NIH HHS P30 CA008748NCI NIH HHS PO1 CA 55349 and CA23766NCI NIH HHS R01 CA055349NCI NIH HHS R35 CA241894NCI NIH HHS T32 CA062948NIGMS NIH HHS T32 GM007739NIGMS NIH HHS T32GM07739NIH HHS DP2 CA225212
6 · The paper itself

Abstract

Tumors often co-exist with T cells that recognize somatically mutated peptides presented by cancer cells on major histocompatibility complex I (MHC-I). However, it is unknown why the immune system fails to eliminate immune-recognizable neoplasms before they manifest as frank disease. To understand the determinants of MHC-I peptide immunogenicity in nascent tumors, we tested the ability of thousands of MHC-I ligands to cause tumor subclone rejection in immunocompetent mice by use of a new 'PresentER' antigen presentation platform. Surprisingly, we show that immunogenic tumor antigens do not lead to immune-mediated cell rejection when the fraction of cells bearing each antigen ('clonal fraction') is low. Moreover, the clonal fraction necessary to lead to rejection of immunogenic tumor subclones depends on the antigen. These data indicate that tumor neoantigen heterogeneity has an underappreciated impact on immune elimination of cancer cells and has implications for the design of immunotherapeutics such as cancer vaccines.

Indexed as

AnimalsAntigen PresentationAntigens, NeoplasmBase SequenceBystander EffectCell Line, TumorClone CellsCytotoxicity, ImmunologicGene LibraryImmunocompetenceMajor Histocompatibility ComplexMice, Inbred C57BLNeoplasmsPeptidesReceptors for Activated C KinaseT-LymphocytesAntigens, Neoplasmpeptide IPeptidesReceptors for Activated C Kinasecancer biologycancer immunologygenetic heterogeneitymousetumor antigenstumor evolutiontumor resistance to immune response

Identifiers

PMID30499773
PMCPMC6269121
OpenAlexW2902524594

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.