Evidence map›Paper›PMID 30499053›Full record

ArticleGenes & genomics2019

Short rare minisatellite variant of BORIS-MS2 is related to bladder cancer susceptibility.

Tae Nam Kim, Won-Tae Kim, Mi-So Jeong, Mi-Hye Mun, Min-Hye Kim, Jeong Zoo Lee, Sun-Hee Leem

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Article in Genes & genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Genetic Variants ofFrontiers in oncology · 2020
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Tae Nam KimDepartment of Urology, Medical Research Institute, Pusan National University Hospital, Busan, 49241, South Korea.
Won-Tae KimDepartment of Biological Sciences, Dong-A University, Busan, 49315, South Korea.
Mi-So JeongDepartment of Biological Sciences, Dong-A University, Busan, 49315, South Korea.
Mi-Hye MunDepartment of Biological Sciences, Dong-A University, Busan, 49315, South Korea.
Min-Hye KimDepartment of Biological Sciences, Dong-A University, Busan, 49315, South Korea.
Jeong Zoo LeeDepartment of Urology, Medical Research Institute, Pusan National University Hospital, Busan, 49241, South Korea.
Sun-Hee LeemDepartment of Biological Sciences, Dong-A University, Busan, 49315, South Korea. shleem@dau.ac.kr.ORCID http://orcid.org/0000-0001-6371-7971
Dong-A University · KRPusan National University Hospital · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBORIS/CTCFL, a paralog of CTCF and member of the cancer-testicular antigen family, is abnormally activated in multiple cancers.

objectiveWe investigated the relationship between polymorphic variants of the BORIS minisatellite 2 (BORIS-MS2), located within the 5' upstream promoter region of BORIS, and bladder cancer.

methodsWe used case-control study with 516 controls and 113 bladder cancer patients. To evaluate whether minisatellite variants play a role in BORIS expression, we examined the transcript levels of a reporter gene linked to these minisatellites in cell lines. We also examined BORIS expression in cancerous and non-cancerous bladder tissue.

resultsA statistically significant association was identified between the short rare allele (13-repeat) and bladder cancer incidence (odds ratio (OR) 2.97, 95% confidence interval (CI) [1.14, 7.74]; P = 0.020). In particular, short rare alleles in the younger group (aged < 65) were associated with statistically significant increase in bladder cancer risk (OR 5.38, CI [1.32, 21.87]; P = 0.01). The BORIS-MS2 region acted as a negative regulator, and the expression level of the luciferase reporter in bladder cancer cells was less effectively inhibited than in normal cells. Furthermore, the expression of BORIS mRNA significantly differed (P < 0.05) between normal and cancerous muscle-invasive bladder cancer tissues, and relationship to clinical parameters was observed.

conclusionsThe short rare allele of BORIS-MS2 could be used to identify bladder cancer risk. BORIS expression levels have been shown to increase with the progression of bladder cancer, could be used as a biomarker for its progression.

Indexed as

Polymorphism, GeneticAdultAgedBiomarkers, TumorCell Line, TumorDNA-Binding ProteinsFemaleHEK293 CellsHumansMaleMiddle AgedMinisatellite RepeatsPromoter Regions, GeneticUrinary Bladder NeoplasmsBiomarkers, TumorCTCFL protein, humanDNA-Binding ProteinsBladder cancerCase-control studyCTCFL/BORISMinisatellite polymorphisms

Identifiers

PMID30499053
OpenAlexW2902626533

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.