Evidence map›Paper›PMID 30498427›Full record

ArticleFrontiers in neuroscience2018

Voxel-Based Statistical Analysis of 3D Immunostained Tissue Imaging.

Michel E Vandenberghe, Nicolas Souedet, Anne-Sophie Hérard, Anne-Marie Ayral, Florent Letronne, Yaël Balbastre, Elmahdi Sadouni, Philippe Hantraye, Marc Dhenain, Frédérique Frouin and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neuroscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.8field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. The mouse brain after foot shock in four dimensions: Temporal dynamics at a single-cell resolution.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 1 country.

Michel E VandenbergheCEA, DRF, Institut François Jacob Molecular Imaging Research Center, Fontenay-aux-Roses, France.
Nicolas SouedetCEA, DRF, Institut François Jacob Molecular Imaging Research Center, Fontenay-aux-Roses, France.
Anne-Sophie HérardCEA, DRF, Institut François Jacob Molecular Imaging Research Center, Fontenay-aux-Roses, France.
Anne-Marie AyralINSERM U1167, Institut Pasteur de Lille Université Lille-Nord de France, Lille, France.
Florent LetronneINSERM U1167, Institut Pasteur de Lille Université Lille-Nord de France, Lille, France.
Yaël BalbastreCEA, DRF, Institut François Jacob Molecular Imaging Research Center, Fontenay-aux-Roses, France.
Elmahdi SadouniCEA, DRF, Institut François Jacob Molecular Imaging Research Center, Fontenay-aux-Roses, France.
Philippe HantrayeCEA, DRF, Institut François Jacob Molecular Imaging Research Center, Fontenay-aux-Roses, France.
Marc DhenainCEA, DRF, Institut François Jacob Molecular Imaging Research Center, Fontenay-aux-Roses, France.
Frédérique FrouinLaboratoire Imagerie Moléculaire in vivo (IMIV UMR 1023 Inserm/CEA/Université Paris Sud - ERL 9218 CNRS) Orsay, France.
Jean-Charles LambertINSERM U1167, Institut Pasteur de Lille Université Lille-Nord de France, Lille, France.
Thierry DelzescauxCEA, DRF, Institut François Jacob Molecular Imaging Research Center, Fontenay-aux-Roses, France.
Université Paris-Sud · FRCEA Paris-Saclay - Etablissement de Fontenay-aux-roses · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRInserm · FRCentre National de la Recherche Scientifique · FRInstitut Pasteur de Lille · FRUniversité Paris-Saclay · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently developed techniques to visualize immunostained tissues in 3D and in large samples have expanded the scope of microscopic investigations at the level of the whole brain. Here, we propose to adapt voxel-based statistical analysis to 3D high-resolution images of the immunostained rodent brain. The proposed approach was first validated with a simulation dataset with known cluster locations. Then, it was applied to characterize the effect of ADAM30, a gene involved in the metabolism of the amyloid precursor protein, in a mouse model of Alzheimer's disease. This work introduces voxel-based analysis of 3D immunostained microscopic brain images and, therefore, opens the door to localized whole-brain exploratory investigation of pathological markers and cellular alterations.

Indexed as

3DAlzheimer's diseaseimmunohistochemistrymicroscopyrodentvoxel-based

Identifiers

PMID30498427
PMCPMC6250035
OpenAlexW2901190383

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.