Evidence map›Paper›PMID 30498034›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Genetic determinants and an epistasis of

Chikashi Terao, Hajime Yoshifuji, Takayoshi Matsumura, Taeko K Naruse, Tomonori Ishii, Yoshikazu Nakaoka, Yohei Kirino, Keitaro Matsuo, Tomoki Origuchi, Masakazu Shimizu and 31 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Frontiers in immunology · 2025
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Identification of the hybrid geneFrontiers in immunology · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors at 16 institutions in 2 countries.

Chikashi TeraoDepartment of Rheumatology and Clinical Immunology, Kyoto University Graduate School of Medicine, Kyoto, Kyoto 606-8507, Japan; a0001101@kuhp.kyoto-u.ac.jp.ORCID 0000-0002-6452-4095
Hajime YoshifujiDepartment of Rheumatology and Clinical Immunology, Kyoto University Graduate School of Medicine, Kyoto, Kyoto 606-8507, Japan.
Takayoshi MatsumuraDepartment of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo, Tokyo 113-8655, Japan.
Taeko K NaruseDepartment of Molecular Pathogenesis, Medical Research Institute, Tokyo Medical and Dental University, Tokyo 113-8510, Japan.
Tomonori IshiiDepartment of Hematology and Rheumatology, Tohoku University School of Medicine, Sendai 980-8574, Japan.
Yoshikazu NakaokaDepartment of Cardiovascular Medicine, Osaka University Graduate School of Medicine, Suita 565-0871, Japan.
Yohei KirinoDepartment of Stem Cell and Immune Regulation, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Keitaro MatsuoDivision of Molecular and Clinical Epidemiology, Aichi Cancer Center Research Institute, Nagoya 464-8681, Japan.
Tomoki OriguchiNagasaki University Graduate School of Biomedical Sciences, Nagasaki 852-8501, Japan.
Masakazu ShimizuCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Kyoto 606-8507, Japan.
Yasuhiro MaejimaDepartment of Cardiovascular Medicine, Tokyo Medical and Dental University, Tokyo 113-8510, Japan.
Eisuke AmiyaDepartment of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo, Tokyo 113-8655, Japan.
Natsuko TamuraDepartment of Cardiovascular Medicine, Tokyo Medical and Dental University, Tokyo 113-8510, Japan.
Takahisa KawaguchiCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Kyoto 606-8507, Japan.
Meiko TakahashiCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Kyoto 606-8507, Japan.
Kazuya SetohCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Kyoto 606-8507, Japan.
Koichiro OhmuraDepartment of Rheumatology and Clinical Immunology, Kyoto University Graduate School of Medicine, Kyoto, Kyoto 606-8507, Japan.
Ryu WatanabeDepartment of Hematology and Rheumatology, Tohoku University School of Medicine, Sendai 980-8574, Japan.
Tetsuya HoritaDivision of Rheumatology, Endocrinology and Nephrology, Hokkaido University Graduate School of Medicine, Sapporo 060-8648, Japan.
Tatsuya AtsumiDivision of Rheumatology, Endocrinology and Nephrology, Hokkaido University Graduate School of Medicine, Sapporo 060-8648, Japan.
Mitsuru MatsukuraDepartment of Surgical Oncology and Vascular Surgery, Graduate School of Medicine, The University of Tokyo, Tokyo 113-8655, Japan.
Tetsuro MiyataDepartment of Surgical Oncology and Vascular Surgery, Graduate School of Medicine, The University of Tokyo, Tokyo 113-8655, Japan.
Yuta KochiDepartment of Allergy and Rheumatology, Graduate School of Medicine, The University of Tokyo, Tokyo 113-8655, Japan.
Toshio SudaCancer Science Institute of Singapore, National University of Singapore, Singapore 117599.
Kazuo TanemotoDepartment of Cardiovascular Surgery, Kawasaki Medical School, Kurashiki 701-0192, Japan.
Akira MeguroDepartment of Ophthalmology and Visual Science, Yokohama City University Graduate School of Medicine, Yokoham 236-0004, Japan.ORCID 0000-0002-9797-0948
Yukinori OkadaLaboratory for Statistical Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama 230-0045, Japan.
Akiyoshi OgimotoDepartment of Cardiology, Pulmonology, Hypertension & Nephrology, Ehime University Graduate School of Medicine, Ehime 791-0295, Japan.
Motohisa YamamotoDepartment of Rheumatology, Sapporo Medical University School of Medicine, Sapporo Medical University, Sapporo 060-8556, Japan.
Hiroki TakahashiDepartment of Rheumatology, Sapporo Medical University School of Medicine, Sapporo Medical University, Sapporo 060-8556, Japan.
Shingo NakayamadaFirst Department of Internal Medicine, School of Medicine, University of Occupational & Environmental Health, Kitakyushu 807-8556, Japan.
Kazuyoshi SaitoFirst Department of Internal Medicine, School of Medicine, University of Occupational & Environmental Health, Kitakyushu 807-8556, Japan.
Masataka KuwanaDepartment of Allergy and Rheumatology, Nippon Medical School Graduate School of Medicine, Tokyo 113-8603, Japan.
Nobuhisa MizukiDepartment of Ophthalmology and Visual Science, Yokohama City University Graduate School of Medicine, Yokoham 236-0004, Japan.
Yasuharu TabaraCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Kyoto 606-8507, Japan.
Atsuhisa UedaDepartment of Stem Cell and Immune Regulation, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Issei KomuroDepartment of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo, Tokyo 113-8655, Japan.
Akinori KimuraDepartment of Molecular Pathogenesis, Medical Research Institute, Tokyo Medical and Dental University, Tokyo 113-8510, Japan.
Mitsuaki IsobeDepartment of Cardiovascular Medicine, Tokyo Medical and Dental University, Tokyo 113-8510, Japan.
Tsuneyo MimoriDepartment of Rheumatology and Clinical Immunology, Kyoto University Graduate School of Medicine, Kyoto, Kyoto 606-8507, Japan.
Fumihiko MatsudaCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Kyoto 606-8507, Japan.
Kyoto University · JPThe University of Tokyo · JPTokyo Medical and Dental University · JPYokohama City University · JPHokkaido University · JPNational University of Singapore · SGSapporo Medical University · JPTohoku University · JPUniversity of Occupational and Environmental Health Japan · JPAichi Cancer Center · JPEhime University · JPKawasaki Medical School · JPNagasaki University · JPNational Cerebral and Cardiovascular Center · JPNippon Medical School · JPRIKEN Center for Integrative Medical Sciences · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Takayasu arteritis (TAK) is a systemic vasculitis with severe complications that affects the aorta and its large branches. HLA-B*52 is an established susceptibility locus to TAK. To date, there are still only a limited number of reports concerning non-HLA susceptibility loci to TAK. We conducted a genome-wide association study (GWAS) and a follow-up study in a total of 633 TAK cases and 5,928 controls. A total of 510,879 SNPs were genotyped, and 5,875,450 SNPs were imputed together with HLA-B*52. Functional annotation of significant loci, enhancer enrichment, and pathway analyses were conducted. We identified four unreported significant loci, namely rs2322599, rs103294, rs17133698, and rs1713450, in

Indexed as

Epistasis, GeneticPolymorphism, Single NucleotideCase-Control StudiesCells, CulturedGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHLA-B52 AntigenHumansKiller Cells, NaturalReceptors, ImmunologicTakayasu ArteritisHLA-B*52:01 antigenHLA-B52 AntigenLILRA3 protein, humanReceptors, Immunologicautoimmunityepistasisgenome-wide association studyHLATakayasu arteritis

Identifiers

PMID30498034
PMCPMC6304955
OpenAlexW2902395823

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.