Evidence map›Paper›PMID 30496306›Full record

ArticlePloS one2018

Modelling the impact of changes in the extracellular environment on the cytosolic free NAD+/NADH ratio during cell culture.

Ross A Kelly, Joseph Leedale, Andy Harrell, Daniel A Beard, Laura E Randle, Amy E Chadwick, Steven D Webb

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. The return of metabolism: biochemistry and physiology of glycolysis.Biological reviews of the Cambridge Philosophical Society · 2026
    Review
  2. Article
  3. Article
  4. The synergism of cytosolic acidosis and reduced NADJournal of biomedical science · 2024
    Article
  5. Review
  6. Global changes to HepG2 cell metabolism in response to galactose treatment.American journal of physiology. Cell physiology · 2021
    Article
  7. Article
  8. Modelling the effects of glucagon during glucose tolerance testing.Theoretical biology & medical modelling · 2019
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Ross A KellyDepartment of Applied Mathematics, Liverpool John Moores University, Liverpool, United Kingdom.ORCID 0000-0002-5505-460X
Joseph LeedaleEPSRC Liverpool Centre for Mathematics in Healthcare, Department of Mathematical Sciences, University of Liverpool, Liverpool, United Kingdom.ORCID 0000-0001-9010-4126
Andy HarrellGlaxoSmithKline, David Jack Centre for Research, Ware, United Kingdom.
Daniel A BeardDepartment of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, Michigan, United States of America.
Laura E RandleDepartment of Pharmacy and Biomolecular Sciences, Liverpool John Moores University, Liverpool, United Kingdom.ORCID 0000-0002-7881-2979
Amy E ChadwickMRC Centre for Drug Safety Science, Department of Molecular and Clinical Pharmacology, University of Liverpool, Liverpool, United Kingdom.
Steven D WebbDepartment of Applied Mathematics, Liverpool John Moores University, Liverpool, United Kingdom.
Engineering and Physical Sciences Research Council · GBLiverpool John Moores University · GBGlaxoSmithKline (United Kingdom) · GBUniversity of Liverpool · GBUniversity of Michigan · US

Funding

Biotechnology and Biological Sciences Research Council BB/L502273/2Medical Research Council MR/L006758/1
6 · The paper itself

Abstract

Cancer cells depend on glucose metabolism via glycolysis as a primary energy source, despite the presence of oxygen and fully functioning mitochondria, in order to promote growth, proliferation and longevity. Glycolysis relies upon NAD+ to accept electrons in the glyceraldehyde-3-phosphate dehydrogenase (GAPDH) reaction, linking the redox state of the cytosolic NAD+ pool to glycolytic rate. The free cytosolic NAD+/NADH ratio is involved in over 700 oxidoreductive enzymatic reactions and as such, the NAD+/NADH ratio is regarded as a metabolic readout of overall cellular redox state. Many experimental techniques that monitor or measure total NAD+ and NADH are unable to distinguish between protein-bound and unbound forms. Yet total NAD+/NADH measurements yield little information, since it is the free forms of NAD+ and NADH that determine the kinetic and thermodynamic influence of redox potential on glycolytic rate. Indirect estimations of free NAD+/NADH are based on the lactate/pyruvate (L/P) ratio at chemical equilibrium, but these measurements are often undermined by high lability. To elucidate the sensitivity of the free NAD+/NADH ratio to changes in extracellular substrate, an in silico model of hepatocarcinoma glycolysis was constructed and validated against in vitro data. Model simulations reveal that over experimentally relevant concentrations, changes in extracellular glucose and lactate concentration during routine cancer cell culture can lead to significant deviations in the NAD+/NADH ratio. Based on the principles of chemical equilibrium, the model provides a platform from which experimentally challenging situations may be examined, suggesting that extracellular substrates play an important role in cellular redox and bioenergetic homeostasis.

Indexed as

Models, BiologicalAdenosine TriphosphateCytoplasmCytosolEnergy MetabolismExtracellular SpaceGlycolysisLactic AcidMetabolic Flux AnalysisNADAdenosine TriphosphateLactic AcidNAD

Identifiers

PMID30496306
PMCPMC6264472
OpenAlexW2902119517

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.