Evidence map›Paper›PMID 30496191›Full record

ArticlePLoS genetics2018

BLM prevents instability of structure-forming DNA sequences at common fragile sites.

Hailong Wang, Shibo Li, Huimin Zhang, Ya Wang, Shuailin Hao, Xiaohua Wu

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Role and Regulation of Pif1 Family Helicases at the Replication Fork.International journal of molecular sciences · 2022
    Review
  12. Homologous recombination within repetitive DNA.Current opinion in genetics & development · 2021
    Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Hailong WangBeijing Key Laboratory of DNA Damage Response and College of Life Science, Capital Normal University, Beijing, China.ORCID 0000-0003-3751-3283
Shibo LiDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, California, United States of America.
Huimin ZhangDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, California, United States of America.
Ya WangBeijing Key Laboratory of DNA Damage Response and College of Life Science, Capital Normal University, Beijing, China.
Shuailin HaoBeijing Key Laboratory of DNA Damage Response and College of Life Science, Capital Normal University, Beijing, China.
Xiaohua WuDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, California, United States of America.ORCID 0000-0003-4947-3047
Capital Normal University · CNScripps Research Institute · US

Funding

Study the mechanisms underlying common fragile site protectionR01CA187052 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2015 to 2025
$4.2M
S-phase checkpoint and rereplication in mammalian cellsR01GM080677 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2010 to 2018
$2.9M
Role of the Mre11 complex in the maintenance of genome stabilityR01CA197995 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2015 to 2019
$2.2M
NCI NIH HHS R01 CA187052NCI NIH HHS R01 CA197995NIGMS NIH HHS R01 GM080677
6 · The paper itself

Abstract

Genome instability often arises at common fragile sites (CFSs) leading to cancer-associated chromosomal rearrangements. However, the underlying mechanisms of how CFS protection is achieved is not well understood. We demonstrate that BLM plays an important role in the maintenance of genome stability of structure-forming AT-rich sequences derived from CFSs (CFS-AT). BLM deficiency leads to increased DSB formation and hyper mitotic recombination at CFS-AT and induces instability of the plasmids containing CFS-AT. We further showed that BLM is required for suppression of CFS breakage upon oncogene expression. Both helicase activity and ATR-mediated phosphorylation of BLM are important for preventing genetic instability at CFS-AT sequences. Furthermore, the role of BLM in protecting CFS-AT is not epistatic to that of FANCM, a translocase that is involved in preserving CFS stability. Loss of BLM helicase activity leads to drastic decrease of cell viability in FANCM deficient cells. We propose that BLM and FANCM utilize different mechanisms to remove DNA secondary structures forming at CFS-AT on replication forks, thereby preventing DSB formation and maintaining CFS stability.

Indexed as

Chromosome Fragile SitesGenomic InstabilityAtaxia Telangiectasia Mutated ProteinsAT Rich SequenceDNADNA Breaks, Double-StrandedDNA HelicasesDNA ReplicationGene ExpressionHumansMitosisNucleic Acid ConformationOncogenesPhosphorylationRecombination, GeneticRecQ HelicasesAtaxia Telangiectasia Mutated ProteinsATR protein, humanBloom syndrome proteinDNADNA HelicasesFANCM protein, humanRecQ Helicases

Identifiers

PMID30496191
PMCPMC6289451
OpenAlexW2902272929

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.