Evidence map›Paper›PMID 30496040›Full record

ArticleBiochimica et biophysica acta. Gene regulatory mechanisms2018

Sensory domain of the cell cycle kinase CckA regulates the differential DNA binding of the master regulator CtrA in Caulobacter crescentus.

Sharath Narayanan, Lokesh Kumar, Sunish Kumar Radhakrishnan

Open access · hybridAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Gene regulatory mechanisms, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. TheJournal of bacteriology · 2024
    Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Construction of a RobustFrontiers in bioengineering and biotechnology · 2020
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sharath NarayananSchool of Biology, Indian Institute of Science Education and Research, Thiruvananthapuram 695551, Kerala, India.
Lokesh KumarSchool of Biology, Indian Institute of Science Education and Research, Thiruvananthapuram 695551, Kerala, India.
Sunish Kumar RadhakrishnanSchool of Biology, Indian Institute of Science Education and Research, Thiruvananthapuram 695551, Kerala, India. Electronic address: sunish@iisertvm.ac.in.
Indian Institute of Science Education and Research Thiruvananthapuram · IN

Funding

DBT-Wellcome Trust India Alliance 500140-Z-09-ZWellcome Trust
6 · The paper itself

Abstract

Sophisticated signaling mechanisms allow bacterial cells to cope with environmental and intracellular challenges. Activation of specific pathways ameliorates these challenges and thereby warrants integrity. Here, we demonstrate the pliability of the CckA-CtrA two-component signaling system in the freshwater bacterium Caulobacter crescentus. Our forward genetic screen to analyze suppressor mutations that can negate the chromosome segregation block induced by the topoisomerase IV inhibitor, NstA, yielded various point mutations in the cell cycle histidine kinase, CckA. Notably, we identified a point mutation in the PAS-B domain of CckA, which resulted in increased levels of phosphorylated CtrA (CtrA~P), the master cell cycle regulator. Surprisingly, this increase in CtrA~P levels did not translate into a genome-wide increase in the DNA occupancy of CtrA, but specifically enriched its affinity for the chromosomal origin of replication, C

Indexed as

Bacterial ProteinsCaulobacter crescentusDNA, BacterialDNA-Binding ProteinsDNA ReplicationHistidine KinasePhenotypePromoter Regions, GeneticProtein BindingProtein DomainsSuppression, GeneticTranscription FactorsBacterial ProteinsCtrA protein, CaulobacterDNA, BacterialDNA-Binding ProteinsHistidine KinaseTranscription Factors

Identifiers

PMID30496040
PMCPMC6169604
OpenAlexW2889398588

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.