Evidence map›Paper›PMID 30488693›Full record

ArticleBiochemistry2018

Transcription-Dependent Formation of Nuclear Granules Containing FUS and RNA Pol II.

Valery F Thompson, Rachel A Victor, Andres A Morera, Mahta Moinpour, Meilani N Liu, Conner C Kisiel, Kaitlyn Pickrel, Charis E Springhower, Jacob C Schwartz

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  8. Review
  9. Co-condensation of proteins with single- and double-stranded DNA.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Valery F Thompson
Rachel A Victor
Andres A Morera
Mahta Moinpour
Meilani N Liu
Conner C Kisiel
Kaitlyn Pickrel
Charis E Springhower
University of Arizona · US

Funding

University of Arizona's Initiatives to Maximize Student DiversityR25GM062584 · NIGMS · UNIVERSITY OF ARIZONA · PI TAX, FRANS E · 2001 to 2017
$7.2M
Analysis of the RNA-binding Protein FUS and Its Role in Neurodegenerative DiseaseR00NS082376 · NINDS · UNIVERSITY OF ARIZONA · PI SCHWARTZ, JACOB C. · 2015 to 2017
$771k
Analysis of the RNA-binding Protein FUS and Its Role in Neurodegenerative DiseaseK99NS082376 · NINDS · UNIVERSITY OF COLORADO · PI SCHWARTZ, JACOB C. · 2013 to 2014
$192k
Radiation and Fluorescence Imaging Technology for Biology and BiochemistryS10OD013237 · OD · UNIVERSITY OF ARIZONA · PI PARK, CHAD KING · 2013 to 2013
$137k
NIGMS NIH HHS R25 GM062584NIH HHS S10 OD013237NINDS NIH HHS K99 NS082376NINDS NIH HHS R00 NS082376
6 · The paper itself

Abstract

Purified recombinant FUsed in Sarcoma (FUS) assembles into an oligomeric state in an RNA-dependent manner to form large condensates. FUS condensates bind and concentrate the C-terminal domain of RNA polymerase II (RNA Pol II). We asked whether a granule in cells contained FUS and RNA Pol II as suggested by the binding of FUS condensates to the polymerase. We developed cross-linking protocols to recover protein particles containing FUS from cells and separated them by size exclusion chromatography. We found a significant fraction of RNA Pol II in large granules containing FUS with diameters of >50 nm or twice that of the RNA Pol II holoenzyme. Inhibition of transcription prevented the polymerase from associating with the granules. Altogether, we found physical evidence of granules containing FUS and RNA Pol II in cells that possess properties comparable to those of in vitro FUS condensates.

Indexed as

Cell NucleusCross-Linking ReagentsHEK293 CellsHumansMicroscopy, Electron, TransmissionModels, BiologicalParticle SizeProtein Interaction Domains and MotifsRecombinant ProteinsRNA-Binding Protein FUSRNA Polymerase IITranscription, GeneticCross-Linking ReagentsFUS protein, humanRecombinant ProteinsRNA-Binding Protein FUSRNA Polymerase II

Identifiers

PMID30488693
PMCPMC9275567
OpenAlexW2902385213

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.