Evidence map›Paper›PMID 30485160›Full record

ArticleMolecular biology of the cell2019

Multilayered regulation of TORC1-body formation in budding yeast.

Arron Sullivan, Ryan L Wallace, Rachel Wellington, Xiangxia Luo, Andrew P Capaldi

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. NADCells · 2025
    Review
  5. Article
  6. TOR Complex 1: Orchestrating Nutrient Signaling and Cell Cycle Progression.International journal of molecular sciences · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. ThemBio · 2022
    Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Frontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Arron SullivanDepartment of Molecular and Cellular Biology, University of Arizona, Tucson, AZ 85721-0206.
Ryan L WallaceDepartment of Molecular and Cellular Biology, University of Arizona, Tucson, AZ 85721-0206.
Rachel WellingtonDepartment of Molecular and Cellular Biology, University of Arizona, Tucson, AZ 85721-0206.
Xiangxia LuoDepartment of Molecular and Cellular Biology, University of Arizona, Tucson, AZ 85721-0206.
Andrew P CapaldiDepartment of Molecular and Cellular Biology, University of Arizona, Tucson, AZ 85721-0206.
University of Arizona · US

Funding

GRADUATE TRAINING IN BIOCHEMISTRY AND MOLECULAR BIOLOGYT32GM008659 · NIGMS · UNIVERSITY OF ARIZONA · PI CAPALDI, ANDREW PAUL, WEINERT, TED A. · 1997 to 2019
$5.3M
Dissection of the TORC1 Signaling Network in YeastR01GM097329 · NIGMS · UNIVERSITY OF ARIZONA · PI CAPALDI, ANDREW PAUL · 2011 to 2024
$4.7M
Graduate Training in Biochemistry and Molecular BiologyT32GM136536 · NIGMS · UNIVERSITY OF ARIZONA · PI Andrew Paul Capaldi, FRANS E TAX · 2020 to 2026
$2.4M
NIGMS NIH HHS R01 GM097329NIGMS NIH HHS T32 GM008659NIGMS NIH HHS T32 GM136536
6 · The paper itself

Abstract

The target of rapamycin kinase complex 1 (TORC1) regulates cell growth and metabolism in eukaryotes. In Saccharomyces cerevisiae, TORC1 activity is known to be controlled by the conserved GTPases, Gtr1/2, and movement into and out of an inactive agglomerate/body. However, it is unclear whether/how these regulatory steps are coupled. Here we show that active Gtr1/2 is a potent inhibitor of TORC1-body formation, but cells missing Gtr1/2 still form TORC1-bodies in a glucose/nitrogen starvation-dependent manner. We also identify 13 new activators of TORC1-body formation and show that seven of these proteins regulate the Gtr1/2-dependent repression of TORC1-body formation, while the remaining proteins drive the subsequent steps in TORC1 agglomeration. Finally, we show that the conserved phosphatidylinositol-3-phosphate (PI(3)P) binding protein, Pib2, forms a complex with TORC1 and overrides the Gtr1/2-dependent repression of TORC1-body formation during starvation. These data provide a unified, systems-level model of TORC1 regulation in yeast.

Indexed as

Mechanistic Target of Rapamycin Complex 1Models, BiologicalProtein DomainsSaccharomyces cerevisiae ProteinsSaccharomycetalesMechanistic Target of Rapamycin Complex 1Saccharomyces cerevisiae Proteins

Identifiers

PMID30485160
PMCPMC6589571
OpenAlexW2902835701

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.