Evidence map›Paper›PMID 30484775›Full record

ArticleeLife2018

TAPBPR mediates peptide dissociation from MHC class I using a leucine lever.

F Tudor Ilca, Andreas Neerincx, Clemens Hermann, Ana Marcu, Stefan Stevanović, Janet E Deane, Louise H Boyle

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
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  3. CryoEM structure of an MHC-I/TAPBPR peptide-bound intermediate reveals the mechanism of antigen proofreading.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  19. Atomistic structure and dynamics of the human MHC-I peptide-loading complex.Proceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

F Tudor IlcaDepartment of Pathology, University of Cambridge, Cambridge, United Kingdom.ORCID https://orcid.org/0000-0002-6582-8007
Andreas NeerincxDepartment of Pathology, University of Cambridge, Cambridge, United Kingdom.ORCID http://orcid.org/0000-0002-6902-5383
Clemens HermannDepartment of Integrative Biomedical Sciences, Division of Chemical and Systems Biology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.ORCID http://orcid.org/0000-0002-0009-9501
Ana MarcuDepartment of Immunology, Interfaculty Institute for Cell Biology, University of Tübingen, Tübingen, Germany.ORCID http://orcid.org/0000-0003-0808-8097
Stefan StevanovićDepartment of Immunology, Interfaculty Institute for Cell Biology, University of Tübingen, Tübingen, Germany.ORCID http://orcid.org/0000-0003-1954-7762
Janet E DeaneCambridge Institute for Medical Research, University of Cambridge, Cambridge, United Kingdom.ORCID http://orcid.org/0000-0002-4863-0330
Louise H BoyleDepartment of Pathology, University of Cambridge, Cambridge, United Kingdom.ORCID http://orcid.org/0000-0002-3105-6555
University of Cambridge · GBDeutschen Konsortium für Translationale Krebsforschung · DEUniversity of Cape Town · ZAUniversity of Tübingen · DE

Funding

Wellcome TrustWellcome Trust 104647/Z/14/ZWellcome Trust 109076/Z/15/A
6 · The paper itself

Abstract

Tapasin and TAPBPR are known to perform peptide editing on major histocompatibility complex class I (MHC I) molecules; however, the precise molecular mechanism(s) involved in this process remain largely enigmatic. Here, using immunopeptidomics in combination with novel cell-based assays that assess TAPBPR-mediated peptide exchange, we reveal a critical role for the K22-D35 loop of TAPBPR in mediating peptide exchange on MHC I. We identify a specific leucine within this loop that enables TAPBPR to facilitate peptide dissociation from MHC I. Moreover, we delineate the molecular features of the MHC I F pocket required for TAPBPR to promote peptide dissociation in a loop-dependent manner. These data reveal that chaperone-mediated peptide editing on MHC I can occur by different mechanisms dependent on the C-terminal residue that the MHC I accommodates in its F pocket and provide novel insights that may inform the therapeutic potential of TAPBPR manipulation to increase tumour immunogenicity.

Indexed as

Molecular Docking SimulationAmino Acid SequenceAntigen PresentationBinding SitesHeLa CellsHistocompatibility Antigens Class IHLA-A AntigensHumansImmunoglobulinsLeucineMembrane ProteinsMutationPeptidesProtein BindingProtein DomainsHistocompatibility Antigens Class IHLA-A AntigensImmunoglobulinsLeucineMembrane ProteinsPeptidesTAPBPL protein, humanantigen presentationantigen processinghumanimmunologyinflammationmajor histocompatibility complexTAPBPR/TAPBPL

Identifiers

PMID30484775
PMCPMC6307860
OpenAlexW2899114888

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.