Evidence map›Paper›PMID 30482847›Full record

ArticleMolecular & cellular proteomics : MCP2019

Dynamic Phosphoproteomics Uncovers Signaling Pathways Modulated by Anti-oncogenic Sphingolipid Analogs.

Peter Kubiniok, Brendan T Finicle, Fanny Piffaretti, Alison N McCracken, Michael Perryman, Stephen Hanessian, Aimee L Edinger, Pierre Thibault

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  3. [Progress in enrichment methods for proteinSe pu = Chinese journal of chromatography · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Peter KubiniokFrom the ‡Institute for Research in Immunology and Cancer, Université de Montréal, C.P. 6128, Succursale centre-ville, Montréal, Québec, H3C 3J7, Canada.
Brendan T Finicle¶Department of Developmental and Cell Biology, University of California Irvine, Irvine CA 92697.
Fanny PiffarettiFrom the ‡Institute for Research in Immunology and Cancer, Université de Montréal, C.P. 6128, Succursale centre-ville, Montréal, Québec, H3C 3J7, Canada.
Alison N McCracken¶Department of Developmental and Cell Biology, University of California Irvine, Irvine CA 92697.
Michael Perryman§Department of Chemistry, Université de Montréal, Quebec, H3C 3J7, Canada.
Stephen Hanessian§Department of Chemistry, Université de Montréal, Quebec, H3C 3J7, Canada.
Aimee L Edinger¶Department of Developmental and Cell Biology, University of California Irvine, Irvine CA 92697; pierre.thibault@umontreal.ca.
Pierre ThibaultFrom the ‡Institute for Research in Immunology and Cancer, Université de Montréal, C.P. 6128, Succursale centre-ville, Montréal, Québec, H3C 3J7, Canada; aedinger@uci.edu.
Université de Montréal · CAUniversity of California, Irvine · USInstitute for Research in Immunology and Cancer · CA

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
CARCINOGENESIST32CA009054 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI EDINGER, AIMEE L, FRUMAN, DAVID ALEXANDER · 1985 to 2025
$8.6M
Effects of sphingolipids on nutrient transporter expression and bioenergeticsR01GM089919 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI EDINGER, AIMEE L · 2010 to 2014
$1.5M
Identification of the anti-neoplastic target of bioactive FTY720 analogsR21CA178230 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI EDINGER, AIMEE L, HANESSIAN, STEPHEN · 2013 to 2014
$338k
NCI NIH HHS P30 CA062203NCI NIH HHS R21 CA178230NIGMS NIH HHS R01 GM089919
6 · The paper itself

Abstract

The anti-neoplastic sphingolipid analog SH-BC-893 starves cancer cells to death by down-regulating cell surface nutrient transporters and blocking lysosomal trafficking events. These effects are mediated by the activation of protein phosphatase 2A (PP2A). To identify putative PP2A substrates, we used quantitative phosphoproteomics to profile the temporal changes in protein phosphorylation in FL5.12 cells following incubation with SH-BC-893 or the specific PP2A inhibitor LB-100. These analyses enabled the profiling of more than 15,000 phosphorylation sites, of which 958 sites on 644 proteins were dynamically regulated. We identified 114 putative PP2A substrates including several nutrient transporter proteins, GTPase regulators (

Indexed as

AnimalsBridged Bicyclo Compounds, HeterocyclicCell Line, TumorGene Expression RegulationMicePhosphoproteinsPhosphorylationPiperazinesProtein Phosphatase 2ProteomicsSignal TransductionSphingolipidsSphingosineBridged Bicyclo Compounds, HeterocyclicLB100N-acetylsphingosinePhosphoproteinsPiperazinesProtein Phosphatase 2SphingolipidsSphingosineCancer Biology*Cell biology*PhosphoproteomePhosphorylationQuantification

Identifiers

PMID30482847
PMCPMC6398214
OpenAlexW2902542754

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.