Evidence map›Paper›PMID 30482162›Full record

ArticleBMC plant biology2018

Dual positive and negative control of Chlamydomonas PII signal transduction protein expression by nitrate/nitrite and NO via the components of nitric oxide cycle.

Zhanneta Zalutskaya, Lidiya Kochemasova, Elena Ermilova

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 25 citations in OpenAlex.

  1. N-Acetyl-L-glutamate Kinase ofInternational journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Zhanneta ZalutskayaBiological Faculty, Saint-Petersburg State University, Saint-Petersburg, Russia.
Lidiya KochemasovaBiological Faculty, Saint-Petersburg State University, Saint-Petersburg, Russia.
Elena ErmilovaBiological Faculty, Saint-Petersburg State University, Saint-Petersburg, Russia. e.ermilova@spbu.ru.ORCID http://orcid.org/0000-0003-0800-5933
St Petersburg University · RU

Funding

Saint Petersburg State University 1.65.38.2017
6 · The paper itself

Abstract

backgroundThe PII proteins constitute a large superfamily, present in all domains of life. Until now, PII proteins research in Chloroplastida (green algae and land plants) has mainly focused on post-translation regulation of these signal transductors. Emerging evidence suggests that PII level is tightly controlled with regard to the nitrogen source and the physiological state of cells.

resultHere we identify that a balance of positive (nitrate and nitrite) and negative (nitric oxide) signals regulates Chlamydomonas GLB1. We found that PII expression is downregulated by ammonium through a nitric oxide (NO)-dependent mechanism. We show that nitrate reductase (NR) and its partner, truncated hemoglobin 1 (THB1), participate in a signaling pathway for dual control of GLB1 expression. Moreover, NO dependent guanilate cyclase appeared to be involved in the negative control of GLB1 transcription.

conclusionThis study has revealed the existence of the complex GLB1 control at transcription level, which is dependent on nitrogen source. Importantly, we found that GLB1 gene expression pattern is very similar to that observed for nitrate assimilation genes, suggesting interconnecting/coordinating PII-dependent and nitrate assimilation pathways.

Indexed as

ChlamydomonasGene Expression RegulationMetabolic Networks and PathwaysNitratesNitric OxideNitritesPII Nitrogen Regulatory ProteinsTranscription, GeneticNitratesNitric OxideNitritesPII Nitrogen Regulatory ProteinsChlamydomonas reinhardtiiNitrateNitriteNO signalingPII signal transduction proteinTruncated hemoglobin

Identifiers

PMID30482162
PMCPMC6258461
OpenAlexW2902119461

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.