Evidence map›Paper›PMID 30480442›Full record

ArticleBiochemistry2019

Chemometric Approaches for Developing Infrared Nanosensors To Image Anthracyclines.

Jackson Travis Del Bonis-O'Donnell, Rebecca L Pinals, Sanghwa Jeong, Ami Thakrar, Russ D Wolfinger, Markita P Landry

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. High-throughput SWCNT NIR-II screening enables cell andbioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. Biosensing with Fluorescent Carbon Nanotubes.Angewandte Chemie (International ed. in English) · 2022
    Review
  8. Synthetic nanosensors for imaging neuromodulators.Journal of neuroscience methods · 2021
    Review
  9. AnNano letters · 2019
    Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jackson Travis Del Bonis-O'DonnellDepartment of Chemical and Biomolecular Engineering , University of California , Berkeley , California 94720 , United States.ORCID 0000-0002-9135-2102
Rebecca L PinalsDepartment of Chemical and Biomolecular Engineering , University of California , Berkeley , California 94720 , United States.
Sanghwa JeongDepartment of Chemical and Biomolecular Engineering , University of California , Berkeley , California 94720 , United States.
Ami ThakrarDepartment of Chemical and Biomolecular Engineering , University of California , Berkeley , California 94720 , United States.
Russ D WolfingerSAS Institute Inc. , Cary , North Carolina 27513 , United States.
Markita P LandryDepartment of Chemical and Biomolecular Engineering , University of California , Berkeley , California 94720 , United States.ORCID 0000-0002-5832-8522
University of California, Berkeley · USQB3 · USSAS Institute (United States) · US

Funding

Single-Molecule Imaging of Biological Trauma:Cytokine-Based Intracellular CommunicationR35GM128922 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI LANDRY, MARKITA · 2019 to 2023
$2.0M
Novel optical probe for dopamine release in neural circuitsR21EY029405 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI FELLER, MARLA, LANDRY, MARKITA · 2018 to 2019
$428k
Optical montoring of modulatory neurotransmitter levels using new infrared nanonsensorsR21DA044010 · NIDA · UNIVERSITY OF CALIFORNIA BERKELEY · PI WILBRECHT, LINDA E · 2017 to 2018
$323k
NEI NIH HHS R21 EY029405NIDA NIH HHS R21 DA044010NIGMS NIH HHS R35 GM128922
6 · The paper itself

Abstract

Generation, identification, and validation of optical probes to image molecular targets in a biological milieu remain a challenge. Synthetic molecular recognition approaches leveraging the intrinsic near-infrared fluorescence of single-walled carbon nanotubes are promising for long-term biochemical imaging in tissues. However, generation of nanosensors for selective imaging of molecular targets requires a heuristic approach. Here, we present a chemometric platform for rapidly screening libraries of candidate single-walled carbon nanotube nanosensors against biochemical analytes to quantify the fluorescence response to small molecules, including vitamins, neurotransmitters, and chemotherapeutics. We further show this method can be applied to identify biochemical analytes that selectively modulate the intrinsic near-infrared fluorescence of candidate nanosensors. Chemometric analysis thus enables identification of nanosensor-analyte "hits" and also nanosensor fluorescence signaling modalities such as wavelength shifts that are optimal for translation to biological imaging. Through this approach, we identify and characterize a nanosensor for the chemotherapeutic anthracycline doxorubicin (DOX), which provides a ≤17 nm fluorescence red-shift and exhibits an 8 μM limit of detection, compatible with peak circulatory concentrations of doxorubicin common in therapeutic administration. We demonstrate the selectivity of this nanosensor over dacarbazine, a chemotherapeutic commonly co-injected with doxorubicin. Lastly, we establish nanosensor tissue compatibility for imaging of doxorubicin in muscle tissue by incorporating nanosensors into the mouse hindlimb and measuring the nanosensor response to exogenous DOX administration. Our results motivate chemometric approaches to nanosensor discovery for chronic imaging of drug partitioning into tissues and toward real-time monitoring of drug accumulation.

Indexed as

FluorescenceAnimalsAntibiotics, AntineoplasticBiosensing TechniquesBloodDoxorubicinHindlimbHumansMiceMolecular ImagingNanotechnologyNanotubes, CarbonSmall Molecule LibrariesAntibiotics, AntineoplasticDoxorubicinNanotubes, CarbonSmall Molecule Libraries

Identifiers

PMID30480442
PMCPMC6411385
OpenAlexW2890623309

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.