Evidence map›Paper›PMID 30480434›Full record

ArticleBiochemistry2018

Random Formation of G-Quadruplexes in the Full-Length Human Telomere Overhangs Leads to a Kinetic Folding Pattern with Targetable Vacant G-Tracts.

Jibin Abraham Punnoose, Yue Ma, Mohammed Enamul Hoque, Yunxi Cui, Shogo Sasaki, Athena Huixin Guo, Kazuo Nagasawa, Hanbin Mao

Abstract read
In one paragraph

Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Rational Polyligand Design for G-Quadruplex Multimer Stabilization.Journal of chemical information and modeling · 2026
    Article
  2. Technologies for engineering repetitive DNA.Quantitative biology (Beijing, China) · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Protection of the Telomeric Junction by the Shelterin Complex.Journal of the American Chemical Society · 2024
    Article
  10. Protection of the Telomeric Junction by the Shelterin Complex.bioRxiv : the preprint server for biology · 2024
    Article
  11. Review
  12. Article
  13. Stacking Interactions and Flexibility of Human Telomeric Multimers.Journal of the American Chemical Society · 2023
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jibin Abraham PunnooseDepartment of Chemistry and Biochemistry , Kent State University , Kent , Ohio 44242 , United States.ORCID 0000-0003-2367-6874
Yue MaDepartment of Biotechnology and Life Science Faculty of Technology , Tokyo University of Agriculture and Technology (TUAT) , 2-14-16 Naka-cho , Koganeishi, Tokyo 184-8588 , Japan.
Mohammed Enamul HoqueDepartment of Chemistry and Biochemistry , Kent State University , Kent , Ohio 44242 , United States.ORCID 0000-0003-2439-2355
Yunxi CuiDepartment of Chemistry and Biochemistry , Kent State University , Kent , Ohio 44242 , United States.
Shogo SasakiDepartment of Biotechnology and Life Science Faculty of Technology , Tokyo University of Agriculture and Technology (TUAT) , 2-14-16 Naka-cho , Koganeishi, Tokyo 184-8588 , Japan.
Athena Huixin GuoDepartment of Chemistry and Biochemistry , Kent State University , Kent , Ohio 44242 , United States.
Kazuo NagasawaDepartment of Biotechnology and Life Science Faculty of Technology , Tokyo University of Agriculture and Technology (TUAT) , 2-14-16 Naka-cho , Koganeishi, Tokyo 184-8588 , Japan.ORCID 0000-0002-0437-948X
Hanbin MaoDepartment of Chemistry and Biochemistry , Kent State University , Kent , Ohio 44242 , United States.ORCID 0000-0002-6720-9429

Funding

Specific Recognition of G-quadruplexesR01CA236350 · NCI · KENT STATE UNIVERSITY · PI MAO, HANBIN · 2018 to 2022
$1.6M
NCI NIH HHS R01 CA236350
6 · The paper itself

Abstract

G-Quadruplexes formed in the 3' telomere overhang (∼200 nucleotides) have been shown to regulate biological functions of human telomeres. The mechanism governing the population pattern of multiple telomeric G-quadruplexes is yet to be elucidated inside the telomeric overhang in a time window shorter than thermodynamic equilibrium. Using a single-molecule force ramping assay, we quantified G-quadruplex populations in telomere overhangs over a full physiological range of 99-291 nucleotides. We found that G-quadruplexes randomly form in these overhangs within seconds, which leads to a population governed by a kinetic, rather than a thermodynamic, folding pattern. The kinetic folding gives rise to vacant G-tracts between G-quadruplexes. By targeting these vacant G-tracts using complementary DNA fragments, we demonstrated that binding to the telomeric G-quadruplexes becomes more efficient and specific for telomestatin derivatives.

Indexed as

G-QuadruplexesBase SequenceDNA, CruciformHumansKineticsModels, MolecularNucleic Acid ConformationSingle Molecule ImagingTelomereThermodynamicsDNA, Cruciform

Identifiers

PMID30480434
PMCPMC6684037

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.