Evidence map›Paper›PMID 30479693›Full record

ArticleOncotarget2018

Prognostic significance of tumor genotypes and CD8+ infiltrates in stage I-III colorectal cancer.

Elena Fountzilas, Vassiliki Kotoula, Ioannis Tikas, Kyriaki Manousou, Kyriaki Papadopoulou, Christos Poulios, Vasilios Karavasilis, Ioannis Efstratiou, Dimitrios Pectasides, Kleo Papaparaskeva and 11 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. GZMKNature communications · 2022
    Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Differential gene expression of tumor-infiltrating CD8Journal for immunotherapy of cancer · 2020
    Article
  11. Th17 cells inhibit CD8Journal of hematology & oncology · 2020
    Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 13 institutions in 2 countries.

Elena FountzilasDepartment of Investigational Cancer Therapeutics, University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Vassiliki KotoulaDepartment of Pathology, Faculty of Medicine, School of Health Sciences, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Ioannis TikasLaboratory of Molecular Oncology, Hellenic Foundation for Cancer Research/Aristotle University of Thessaloniki, Thessaloniki, Greece.
Kyriaki ManousouSection of Biostatistics, Hellenic Cooperative Oncology Group, Athens, Greece.
Kyriaki PapadopoulouLaboratory of Molecular Oncology, Hellenic Foundation for Cancer Research/Aristotle University of Thessaloniki, Thessaloniki, Greece.
Christos PouliosDepartment of Pathology, Faculty of Medicine, School of Health Sciences, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Vasilios KaravasilisDepartment of Medical Oncology, Papageorgiou Hospital, Faculty of Medicine, School of Health Sciences, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Ioannis EfstratiouDepartment of Pathology, Papageorgiou Hospital, Thessaloniki, Greece.
Dimitrios PectasidesOncology Section, Second Department of Internal Medicine, Hippokration Hospital, Athens, Greece.
Kleo PapaparaskevaDepartment of Pathology, Konstantopouleio Agia Olga General Hospital, Athens, Greece.
Ioannis VarthalitisOncology Department, General Hospital of Chania, Crete, Greece.
Christos ChristodoulouSecond Department of Medical Oncology, Metropolitan Hospital, Piraeus, Greece.
George PapatsibasOncology Department, University General Hospital of Larissa, Larissa, Greece.
Sofia ChrisafiLaboratory of Molecular Oncology, Hellenic Foundation for Cancer Research/Aristotle University of Thessaloniki, Thessaloniki, Greece.
Georgios K GlantzounisDepartment of Surgery, University Hospital of Ioannina and School of Medicine, University of Ioannina, Greece.
Amanda PsyrriDivision of Oncology, Second Department of Internal Medicine, Attikon University Hospital, Athens, Greece.
Gerasimos AravantinosSecond Department of Medical Oncology, Agii Anargiri Cancer Hospital, Athens, Greece.
Georgia-Angeliki KoliouSection of Biostatistics, Hellenic Cooperative Oncology Group, Athens, Greece.
George K KoukoulisDepartment of Pathology, Faculty of Medicine, University of Thessaly, Larissa, Greece.
George E PentheroudakisDepartment of Medical Oncology, Ioannina University Hospital, Ioannina, Greece.
George FountzilasLaboratory of Molecular Oncology, Hellenic Foundation for Cancer Research/Aristotle University of Thessaloniki, Thessaloniki, Greece.
Aristotle University of Thessaloniki · GRHellenic Cooperative Oncology Group · GRUniversity Hospital of Ioannina · GRAgia Olga Hospital · GRChania General Hospital ”St. George” · GRHippocration General Hospital · GRHospital Agioi Anargyroi · GRMetropolitan Hospital · GRPapageorgiou General Hospital · GRThe University of Texas MD Anderson Cancer Center · USUniversity General Hospital Attikon · GRUniversity Hospital of Larissa · GRUniversity of Thessaly · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe explored the clinical significance of tumor genotypes and immunophenotypes in non-metastatic colorectal cancer (CRC).

methodsIn primary tumors (paraffin blocks) from 412 CRC patients treated with adjuvant chemotherapy, we examined pathogenic mutations (panel NGS; 347 informative); mismatch repair (MMR) immunophenotype (360 informative); and CD8+ lymphocyte density (high - low; 412 informative). The primary outcome measure was disease-free survival (DFS).

resultsWe evaluated 1713 pathogenic mutations (median: 3 per tumor; range 0-49); 118/412 (28.6%) tumors exhibited high CD8+ density; and, 40/360 (11.1%) were MMR-deficient. Compared to MMR-proficient, MMR-deficient tumors exhibited higher CD8+ density (chi-square, p<0.001) and higher pathogenic mutation numbers (p=0.003). High CD8+ density was an independent favorable prognosticator (HR=0.49, 95%CI 0.29-0.84, Wald's p=0.010). Pathogenic BRCA1 and ARID1A mutations were inversely associated with each other (p<0.001), were not associated with MMR-deficiency or CD8+ density, but both independently predicted for unfavorable DFS (HR=1.98, 95%CI 1.12-3.48, p=0.018 and HR=1.99, 95%CI 1.11-3.54, p=0.020, respectively).

conclusionIn non-metastatic CRC, high CD8+ lymphocyte density confers a favorable prognosis and may be developed as a single marker in routine diagnostics. The unfavorable prognostic effect of pathogenic BRCA1 and ARID1A mutations is a novel observation that, if further validated, may improve treatment selection.

Indexed as

ARID1ABRCA1CD8MMRtargeted NGS

Identifiers

PMID30479693
PMCPMC6235022
OpenAlexW2899096432

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.