Evidence map›Paper›PMID 30478176›Full record

ArticleThe Journal of biological chemistry2019

Distinct mechanisms govern the phosphorylation of different SR protein splicing factors.

Yunxin Long, Weng Hong Sou, Kristen Wing Yu Yung, Haizhen Liu, Stephanie Winn Chee Wan, Qingyun Li, Chuyue Zeng, Carmen Oi Kwan Law, Gordon Ho Ching Chan, Terrence Chi Kong Lau and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 1 synthesis or guideline pooled it, 79 citations in OpenAlex.

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  19. Novel CDKL5 targets identified in human iPSC-derived neurons.Cellular and molecular life sciences : CMLS · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Yunxin LongSchool of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China.
Weng Hong SouSchool of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China.
Kristen Wing Yu YungSchool of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China.
Haizhen LiuSchool of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China.
Stephanie Winn Chee WanSchool of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China.
Qingyun LiSchool of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China.
Chuyue ZengSchool of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China.
Carmen Oi Kwan LawDepartment of Biomedical Sciences, City University of Hong Kong, Kowloon, Hong Kong, China.
Gordon Ho Ching ChanSchool of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China.
Terrence Chi Kong LauDepartment of Biomedical Sciences, City University of Hong Kong, Kowloon, Hong Kong, China.
Jacky Chi Ki NgoSchool of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China. Electronic address: jackyngo@cuhk.edu.hk.
Chinese University of Hong Kong · HKCity University of Hong Kong · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Serine-arginine (SR) proteins are essential splicing factors containing a canonical RNA recognition motif (RRM), sometimes followed by a pseudo-RRM, and a C-terminal arginine/serine-rich (RS) domain that undergoes multisite phosphorylation. Phosphorylation regulates the localization and activity of SR proteins, and thus may provide insight into their differential biological roles. The phosphorylation mechanism of the prototypic SRSF1 by serine-arginine protein kinase 1 (SRPK1) has been well-studied, but little is known about the phosphorylation of other SR protein members. In the present study, interaction and kinetic assays unveiled how SRSF1 and the single RRM-containing SRSF3 are phosphorylated by SRPK2, another member of the SRPK family. We showed that a conserved SRPK-specific substrate-docking groove in SRPK2 impacts the binding and phosphorylation of both SR proteins, and the localization of SRSF3. We identified a nonconserved residue within the groove that affects the kinase processivity. We demonstrated that, in contrast to SRSF1, for which SRPK-mediated phosphorylation is confined to the N-terminal region of the RS domain, SRSF3 phosphorylation sites are spread throughout its entire RS domain

Indexed as

Amino Acid SequenceHEK293 CellsHumansModels, MolecularPhosphorylationProtein Serine-Threonine KinasesSequence AlignmentSerine-Arginine Splicing FactorsProtein Serine-Threonine KinasesSerine-Arginine Splicing FactorsSRPK2 protein, humanSRSF1 protein, humanSRSF3 protein, humankinase-substrate interactionlocalizationnuclear specklephosphoryl transferpost-translational mechanismpost-translational modification (PTM)processive phosphorylationprotein kinaseprotein phosphorylationregulatory mechanismRNA splicingserine/threonine protein kinasespecklesSRPKSR proteinSRSFsubcellular localization

Identifiers

PMID30478176
PMCPMC6349114
OpenAlexW2902298148

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.