Evidence map›Paper›PMID 30477426›Full record

ArticleBMC plant biology2018

High-density genetic map construction and mapping of the homologous transformation sterility gene (hts) in wheat using GBS markers.

Qian Yang, Zaijun Yang, Haifeng Tang, Yan Yu, Zhenyong Chen, Shuhong Wei, Qinxu Sun, Zhengsong Peng

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Qian YangKey Laboratory of Southwest China Wildlife Resources Conservation (ministry of education), College of Life Science, China West Normal University, Nanchong, 637009, Sichuan, China.
Zaijun YangKey Laboratory of Southwest China Wildlife Resources Conservation (ministry of education), College of Life Science, China West Normal University, Nanchong, 637009, Sichuan, China. yangzaijun1@126.com.
Haifeng TangKey Laboratory of Southwest China Wildlife Resources Conservation (ministry of education), College of Life Science, China West Normal University, Nanchong, 637009, Sichuan, China.
Yan YuKey Laboratory of Southwest China Wildlife Resources Conservation (ministry of education), College of Life Science, China West Normal University, Nanchong, 637009, Sichuan, China.
Zhenyong ChenKey Laboratory of Southwest China Wildlife Resources Conservation (ministry of education), College of Life Science, China West Normal University, Nanchong, 637009, Sichuan, China.
Shuhong WeiKey Laboratory of Southwest China Wildlife Resources Conservation (ministry of education), College of Life Science, China West Normal University, Nanchong, 637009, Sichuan, China.
Qinxu SunKey Laboratory of Southwest China Wildlife Resources Conservation (ministry of education), College of Life Science, China West Normal University, Nanchong, 637009, Sichuan, China.
Zhengsong PengSchool of Agricultural Science, Xichang University, Xichang, 615000, Sichuan, China. pzs8833@126.com.
China West Normal University · CNXichang University · CN

Funding

Foundation of Science & Technology department of Sichuan Province 16JC022National General Cultivation Project of China West Normal University 17C043National Natural Science Foundation of China 31760425
6 · The paper itself

Abstract

backgroundHomologous transformation sterility-1 (HTS-1) is a novel wheat mutant that exhibits pistillody, the transformation of stamens into pistils or pistil-like structures. More extreme phenotypes of this mutation can have six pistils or pistil-like structures without any stamens in a floret. Thus, HTS-1 is highly valuable for studies of wheat hybrid breeding and flower development. Previous studies have shown that two major genes (Pis1 and hts) control pistillody in HTS-1. The Pis1 gene controls the three-pistil trait in the three-pistil wheat mutant and has been mapped on chromosome 2D, but the hts gene has not been mapped or identified. To do so, we crossed HTS-1 with CM28TP (three-pistil mutant) and constructed a high-density linkage map with the F

resultsThe map covered 2779.96 cM, and the genetic distance per chromosome ranged from 37.59 cM to 318.95 cM. The average distance between markers was 1.04 cM. We then mapped hts between GBS-SNP markers 4A_109 and 4A_119, separated by 2.0 cM and 5.2 Mb. To find the candidate genes, the hts region was enlarged to 7.2 Mb, encompassing 752 protein-coding genes. We identified TaWin1 as a possible candidate gene after comparing the 752 genes with 206 common differentially expressed genes between pistillody stamens (PS) versus normal stamens (S) and pistils (P) versus S. Real-time PCR indicated that TaWin1 was highly expressed in HTS-1 during the pistil-and-stamen-differentiating stage, at levels approximately 120 times greater than those in CM28TP. Further analysis indicated that TaWin1 was mainly expressed in HTS-1 PS, supporting its status as a candidate gene of hts. Thus, TaWin1 overexpression probably leads to the transformation of stamens into pistils in wheat.

conclusionsThe results of this study provide a foundation for further research on stamen and pistil development, with implications for wheat-hybrid breeding programs.

Indexed as

Chromosome MappingChromosomes, PlantGenes, PlantFertilityFlowersGenetic MarkersGenotypeMutationTriticumGenetic MarkersGenetic mapGenotyping-by-sequencingPistillodyWheatWin gene

Identifiers

PMID30477426
PMCPMC6258151
OpenAlexW2902364915

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.