Evidence map›Paper›PMID 30477295›Full record

ArticleAsian-Australasian journal of animal sciences2019

Expression profiles of microRNAs in skeletal muscle of sheep by deep sequencing.

Zhijin Liu, Cunyuan Li, Xiaoyue Li, Yang Yao, Wei Ni, Xiangyu Zhang, Yang Cao, Wureli Hazi, Dawei Wang, Renzhe Quan and 6 more

Open access · goldAbstract read
In one paragraph

Article in Asian-Australasian journal of animal sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
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  4. Exploring the miRNAs Profile in Dark-Cutting Beef.Foods (Basel, Switzerland) · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 1 institution in 1 country.

Zhijin LiuCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Cunyuan LiCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Xiaoyue LiCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Yang YaoCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Wei NiCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Xiangyu ZhangCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Yang CaoCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Wureli HaziCollege of Animal Science and Technology, Shihezi University, Shihezi, Xinjiang, 832003, China.
Dawei WangCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Renzhe QuanCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Shuting YuCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Yuyu WuCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Songmin NiuCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Yulong CuiCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Yaseen KhanCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Shengwei HuCollege of Life Sciences, Shihezi University, Shihezi, Xinjiang 832003, China.
Shihezi University · CN

Funding

National Natural Science Foundation of China 31660644National Natural Science Foundation of China 31660718National Natural Science Foundation of China U1803111
6 · The paper itself

Abstract

objectiveMicroRNAs are a class of endogenous small regulatory RNAs that regulate cell proliferation, differentiation and apoptosis. Recent studies on miRNAs are mainly focused on mice, human and pig. However, the studies on miRNAs in skeletal muscle of sheep are not comprehensive.

methodsRNA-seq technology was used to perform genomic analysis of miRNAs in prenatal and postnatal skeletal muscle of sheep. Targeted genes were predicted using miRanda software and miRNA-mRNA interactions were verified by quantitative real-time polymerase chain reaction. To further investigate the function of miRNAs, candidate targeted genes were enriched for analysis using gene ontology (GO) and Kyoto encyclopedia of genes and genomes (KEGG) enrichment.

resultsThe results showed total of 1,086 known miRNAs and 40 new candidate miRNAs were detected in prenatal and postnatal skeletal muscle of sheep. In addition, 345 miRNAs (151 up-regulated, 94 down-regulated) were differentially expressed. Moreover, miRanda software was performed to predict targeted genes of miRNAs, resulting in a total of 2,833 predicted targets, especially miR-381 which targeted multiple muscle-related mRNAs. Furthermore, GO and KEGG pathway analysis confirmed that targeted genes of miRNAs were involved in development of skeletal muscles.

conclusionThis study supplements the miRNA database of sheep, which provides valuable information for further study of the biological function of miRNAs in sheep skeletal muscle.

Indexed as

High-throughput SequencingMicroRNAsSheepSkeletal Muscle

Identifiers

PMID30477295
PMCPMC6498074
OpenAlexW2903080353

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.