Evidence map›Paper›PMID 30476359›Full record

ArticleAngewandte Chemie (International ed. in English)2019

Binding of a Telomestatin Derivative Changes the Mechanical Anisotropy of a Human Telomeric G-Quadruplex.

Sagun Jonchhe, Chiran Ghimire, Yunxi Cui, Shogo Sasaki, Mason McCool, Soyoung Park, Keisuke Iida, Kazuo Nagasawa, Hiroshi Sugiyama, Hanbin Mao

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. DNA origami nano-mechanics.Chemical Society reviews · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Sagun JonchheDepartment of Chemistry & Biochemistry and School of Biomedical Sciences, Kent State University, Kent, OH, 44240, USA.ORCID 0000-0003-4361-6641
Chiran GhimireDepartment of Chemistry & Biochemistry and School of Biomedical Sciences, Kent State University, Kent, OH, 44240, USA.
Yunxi CuiState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin, 300071, China.
Shogo SasakiDepartment of Biotechnology and Life Science Faculty of Technology, Tokyo University of Agriculture and Technology (TUAT), Koganei, Tokyo, 184-8588, Japan.
Mason McCoolDepartment of Chemistry & Biochemistry and School of Biomedical Sciences, Kent State University, Kent, OH, 44240, USA.
Soyoung ParkDepartment of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-oiwakecho, Sakyo-ku, Kyoto, 606-8502, Japan.
Keisuke IidaDepartment of Biotechnology and Life Science Faculty of Technology, Tokyo University of Agriculture and Technology (TUAT), Koganei, Tokyo, 184-8588, Japan.
Kazuo NagasawaDepartment of Biotechnology and Life Science Faculty of Technology, Tokyo University of Agriculture and Technology (TUAT), Koganei, Tokyo, 184-8588, Japan.
Hiroshi SugiyamaDepartment of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-oiwakecho, Sakyo-ku, Kyoto, 606-8502, Japan.
Hanbin MaoDepartment of Chemistry & Biochemistry and School of Biomedical Sciences, Kent State University, Kent, OH, 44240, USA.ORCID 0000-0002-6720-9429
Kent State University · USTokyo University of Agriculture and Technology · JPKyoto University · JPNankai University · CN

Funding

Specific Recognition of G-quadruplexesR01CA236350 · NCI · KENT STATE UNIVERSITY · PI MAO, HANBIN · 2018 to 2022
$1.6M
Japan Society for the Promotion of Science 21655060Japan Society for the Promotion of Science 23310158Japan Society for the Promotion of Science 26282214National Science Foundation 1415883National Science Foundation 1609504NCI NIH HHS R01 CA236350
6 · The paper itself

Abstract

Mechanical anisotropy is an essential property for biomolecules to assume structural and functional roles in mechanobiology. However, there is insufficient information on the mechanical anisotropy of ligand-biomolecule complexes. Herein, we investigated the mechanical property of individual human telomeric G-quadruplexes bound to telomestatin, using optical tweezers. Stacking of the ligand to the G-tetrad planes changes the conformation of the G-quadruplex, which resembles a balloon squeezed in certain directions. Such a squeezed balloon effect strengthens the G-tetrad planes, but dislocates and weakens the loops in the G-quadruplex upon ligand binding. These dynamic interactions indicate that the binding between the ligand and G-quadruplex follows the induced-fit model. We anticipate that the altered mechanical anisotropy of the ligand-G-quadruplex complex can add additional level of regulations on the motor enzymes that process DNA or RNA molecules.

Indexed as

AnisotropyBiomechanical PhenomenaG-QuadruplexesHumansModels, MolecularOxazolesOxazolestelomestatinG-quadruplexesinduced fitligand bindingmechanical anisotropy

Identifiers

PMID30476359
PMCPMC6669079
OpenAlexW2901987421

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.