Evidence map›Paper›PMID 30475889›Full record

ArticlePloS one2018

Development of a rapid and visual detection method for Rickettsia rickettsii combining recombinase polymerase assay with lateral flow test.

Yong Qi, Yinxiu Shao, Jixian Rao, Wanpeng Shen, Qiong Yin, Xiaoling Li, Hongxia Chen, Jiameng Li, Wenwen Zeng, Shulong Zheng and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Rocky Mountain Spotted Fever in Mexico: A Call to Action.The American journal of tropical medicine and hygiene · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Rapid detection ofPeerJ · 2021
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Yong QiHuadong Research Institute for Medicine and Biotechniques, Nanjing, Jiangsu, China.
Yinxiu ShaoChina Pharmaceutical University, Nanjing, Jiangsu, China.
Jixian RaoHuadong Research Institute for Medicine and Biotechniques, Nanjing, Jiangsu, China.
Wanpeng ShenHuadong Research Institute for Medicine and Biotechniques, Nanjing, Jiangsu, China.
Qiong YinChina Pharmaceutical University, Nanjing, Jiangsu, China.
Xiaoling LiChina Pharmaceutical University, Nanjing, Jiangsu, China.
Hongxia ChenHuadong Research Institute for Medicine and Biotechniques, Nanjing, Jiangsu, China.
Jiameng LiHuadong Research Institute for Medicine and Biotechniques, Nanjing, Jiangsu, China.
Wenwen ZengChina Pharmaceutical University, Nanjing, Jiangsu, China.
Shulong ZhengChina Pharmaceutical University, Nanjing, Jiangsu, China.
Suyun LiuChina Pharmaceutical University, Nanjing, Jiangsu, China.
Yuexi LiHuadong Research Institute for Medicine and Biotechniques, Nanjing, Jiangsu, China.ORCID 0000-0002-8491-4402
China Pharmaceutical University · CNHuadong Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesRickettsia rickettsii is the causative agent of Rocky Mountain spotted fever, which is the most severe spotted fever group (SFG) rickettsiosis. Developing a simple and reliable detection method is required.

methodsA detection method for R. rickettsii was established based on a recombinase polymerase amplification (RPA) assay and the lateral flow (LF) test. A specific target sequence was screened, and corresponding primers and probes were designed, synthesized, and screened for establishing an RPA assay with high amplification efficiency. Reagent concentrations, amplification time, and loading volume for strip development were optimized. The detection limit, analytic sensitivity and specificity were evaluated.

resultsA rapid, visual, sensitive and specific method for the detection of R. rickettsii based on RPA and the LF test was successfully established. The novel method had a limit of detection of 10 to 50 copies/reaction without recognizing other organisms. Analytical sensitivity and specificity were ≥90% and 100%, respectively, as evaluated by animal and simulative human samples.

conclusionsUsing the established method, detection could be completed in 30 min with visually detectable results by the naked eye, without requirement of any instrument except a constant temperature equipment. The technique shows superior detection performance and is promising for wide use in the field as well as resource-limited areas for R. rickettsii detection.

Indexed as

Base SequenceDNA, BacterialLimit of DetectionNucleic Acid Amplification TechniquesRecombinasesRickettsia rickettsiiTime FactorsDNA, BacterialRecombinases

Identifiers

PMID30475889
PMCPMC6257923
OpenAlexW2902142018

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.