Evidence map›Paper›PMID 30475201›Full record

ArticleMicrobiology (Reading, England)2019

Regulation of cid and lrg expression by CcpA in Streptococcus mutans.

Hey-Min Kim, Anthony Waters, Matthew E Turner, Kelly C Rice, Sang-Joon Ahn

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Current models in bacterial hemicellulase-encoding gene regulation.Applied microbiology and biotechnology · 2024
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Characterization of the Streptococcus mutansJournal of bacteriology · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Understanding LrgAB Regulation ofFrontiers in microbiology · 2020
    Article
  12. Environmental Triggers ofFrontiers in microbiology · 2020
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hey-Min Kim1​Department of Oral Biology, College of Dentistry, University of Florida, Gainesville, FL 32610, USA.
Anthony Waters2​Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences, University of Florida, Gainesville, FL 32611, USA.
Matthew E Turner2​Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences, University of Florida, Gainesville, FL 32611, USA.
Kelly C Rice2​Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences, University of Florida, Gainesville, FL 32611, USA.
Sang-Joon Ahn1​Department of Oral Biology, College of Dentistry, University of Florida, Gainesville, FL 32610, USA.
University of Florida · US

Funding

Streptococcus mutans adaptation to oxidative stress by the Cid/Lrg systemR01DE025237 · NIDCR · UNIVERSITY OF FLORIDA · PI AHN, SANG-JOON · 2016 to 2020
$1.9M
Role of Lrg pyruvate uptake system in Streptococcus mutans environmental adaptationR56DE025237 · NIDCR · UNIVERSITY OF FLORIDA · PI AHN, SANG-JOON · 2022 to 2022
$362k
NIDCR NIH HHS R01 DE025237NIDCR NIH HHS R56 DE025237
6 · The paper itself

Abstract

The Streptococcus mutans Cid/Lrg system represents an ideal model for studying this organism's ability to withstand various stressors encountered in the oral cavity. The lrg and cid operons display distinct and opposite patterns of expression in response to growth phase and glucose levels, suggesting that the activity and regulation of these proteins must be tightly coordinated in the cell and closely associated with metabolic pathways of the organism. Here, we demonstrate that expression of the cid and lrg operons is directly mediated by a global transcriptional regulator CcpA in response to glucose levels. Comparison of the cid and lrg promoter regions with the conserved CcpA binding motif revealed the presence of two potential cre sites (for CcpA binding) in the cid promoter (designated cid-cre1 and cid-cre2), which were arranged in a similar manner to those previously identified in the lrg promoter region (designated lrg-cre1 and lrg-cre2). We demonstrated that CcpA binds to both the cid and lrg promoters with a high affinity, but has an opposing glucose-dependent effect on the regulation of cid (positive) and lrg (negative) expression. DNase I footprinting analyses revealed potential binding sequences for CcpA in both cid and lrg promoter regions. Collectively, these data suggest that CcpA is a direct regulator of cid and lrg expression, and are suggestive of a potential mechanism by which Cid/Lrg-mediated virulence and cellular homeostasis is integrated with signals associated with both the environment and cellular metabolic status.

Indexed as

Gene Expression Regulation, BacterialOperonBacterial ProteinsGlucosePromoter Regions, GeneticRepressor ProteinsStreptococcus mutansBacterial Proteinscatabolite control proteins, bacteriaGlucoseRepressor ProteinsCcpACid and Lrgglucose metabolismStreptococcus mutans

Identifiers

PMID30475201
PMCPMC6600348
OpenAlexW2902259460

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.