Evidence map›Paper›PMID 30474079›Full record

ArticleJAMIA open2018

Trends in anesthesiology research: a machine learning approach to theme discovery and summarization.

Alexander Rusanov, Riccardo Miotto, Chunhua Weng

Open access · goldAbstract read
In one paragraph

Article in JAMIA open, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Alexander RusanovDepartment of Anesthesiology, Columbia University, New York, New York, USA.
Riccardo MiottoDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Chunhua WengDepartment of Biomedical Informatics, Columbia University, New York, New York, USA.
Columbia University · USIcahn School of Medicine at Mount Sinai · US

Funding

ANESTHESIOLOGY RESEARCH TRAININGT32GM008464 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI CHARLES W EMALA, May Hua · 1992 to 2026
$6.0M
Bridging the Semantic Gap Between Research Eligibility Criteria and Clinical DataR01LM009886 · NLM · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WENG, CHUNHUA · 2009 to 2020
$5.3M
NIGMS NIH HHS T32 GM008464NLM NIH HHS R01 LM009886
6 · The paper itself

Abstract

objectivesTraditionally, summarization of research themes and trends within a given discipline was accomplished by manual review of scientific works in the field. However, with the ushering in of the age of "big data," new methods for discovery of such information become necessary as traditional techniques become increasingly difficult to apply due to the exponential growth of document repositories. Our objectives are to develop a pipeline for unsupervised theme extraction and summarization of thematic trends in document repositories, and to test it by applying it to a specific domain.

methodsTo that end, we detail a pipeline, which utilizes machine learning and natural language processing for unsupervised theme extraction, and a novel method for summarization of thematic trends, and network mapping for visualization of thematic relations. We then apply this pipeline to a collection of anesthesiology abstracts.

resultsWe demonstrate how this pipeline enables discovery of major themes and temporal trends in anesthesiology research and facilitates document classification and corpus exploration. DISCUSSION: The relation of prevalent topics and extracted trends to recent events in both anesthesiology, and healthcare in general, demonstrates the pipeline's utility. Furthermore, the agreement between the unsupervised thematic grouping and human-assigned classification validates the pipeline's accuracy and demonstrates another potential use.

conclusionThe described pipeline enables summarization and exploration of large document repositories, facilitates classification, aids in trend identification. A more robust and user-friendly interface will facilitate the expansion of this methodology to other domains. This will be the focus of future work for our group.

Indexed as

data miningmachine learningnatural language processing

Identifiers

PMID30474079
PMCPMC6241511
OpenAlexW2890692567

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.