Evidence map›Paper›PMID 30473744›Full record

ArticleProceedings. IEEE International Symposium on Biomedical Imaging2018

AUTOMATIC RENAL SEGMENTATION IN DCE-MRI USING CONVOLUTIONAL NEURAL NETWORKS.

Marzieh Haghighi, Simon K Warfield, Sila Kurugol

Abstract read
In one paragraph

Article in Proceedings. IEEE International Symposium on Biomedical Imaging, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

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  17. 3D Deep Learning for Anatomical Structure Segmentation in Multiple Imaging Modalities.Proceedings. IEEE International Symposium on Computer-Based Medical Systems · 2021
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  20. Bulk motion-compensated DCE-MRI for functional imaging of kidneys in newborns.Journal of magnetic resonance imaging : JMRI · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Marzieh HaghighiElectrical and Computer Engineering Department, Northeastern University, Boston, MA, 02115.
Simon K WarfieldRadiology Department, Boston Childrens Hospital; and Harvard Medical School, Boston MA 02115.
Sila KurugolRadiology Department, Boston Childrens Hospital; and Harvard Medical School, Boston MA 02115.

Funding

Novel MRI Imaging Tools and Software for Assessing Pediatric Crohn's DiseaseR01DK100404 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI WARFIELD, SIMON K · 2014 to 2018
$1.9M
NIDDK NIH HHS R01 DK100404
6 · The paper itself

Abstract

Kidney function evaluation using dynamic contrast-enhanced MRI (DCE-MRI) images could help in diagnosis and treatment of kidney diseases of children. Automatic segmentation of renal parenchyma is an important step in this process. In this paper, we propose a time and memory efficient fully automated segmentation method which achieves high segmentation accuracy with running time in the order of seconds in both normal kidneys and kidneys with hydronephrosis. The proposed method is based on a cascaded application of two 3D convolutional neural networks that employs spatial and temporal information at the same time in order to learn the tasks of localization and segmentation of kidneys, respectively. Segmentation performance is evaluated on both normal and abnormal kidneys with varying levels of hydronephrosis. We achieved a mean dice coefficient of 91.4 and 83.6 for normal and abnormal kidneys of pediatric patients, respectively.

Indexed as

CNNDCE-MRIFully-automatedKidney segmentation

Identifiers

PMID30473744
PMCPMC6248325

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.