Evidence map›Paper›PMID 30468573›Full record

ArticleTransboundary and emerging diseases2019

Circulation and genetic diversity of Feline coronavirus type I and II from clinically healthy and FIP-suspected cats in China.

Chunqiu Li, Qiujin Liu, Fanzhi Kong, Donghua Guo, Junjun Zhai, Mingjun Su, Dongbo Sun

Open access · bronzeAbstract read
In one paragraph

Article in Transboundary and emerging diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 70 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Chunqiu LiCollege of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agricultural University, Daqing, China.
Qiujin LiuCollege of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agricultural University, Daqing, China.
Fanzhi KongCollege of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agricultural University, Daqing, China.
Donghua GuoCollege of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agricultural University, Daqing, China.
Junjun ZhaiCollege of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agricultural University, Daqing, China.
Mingjun SuCollege of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agricultural University, Daqing, China.
Dongbo SunCollege of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agricultural University, Daqing, China.ORCID https://orcid.org/0000-0003-3144-3763
Heilongjiang Bayi Agricultural University · CN

Funding

Heilongjiang Province Postdoctoral Science Foundation in China LBH-Q16188Innovation Team Foundation of Heilongjiang Bayi Agricultural University TDJH201804Outstanding Youth Science Foundation of Heilongjiang province in China JC2017007
6 · The paper itself

Abstract

Feline infectious peritonitis (FIP) is a fatal infectious disease of wild and domestic cats, and the occurrence of FIP is frequently reported in China. To trace the evolution of type I and II feline coronavirus in China, 115 samples of ascetic fluid from FIP-suspected cats and 54 fecal samples from clinically healthy cats were collected from veterinary hospitals in China. The presence of FCoV in the samples was detected by RT-PCR targeting the 6b gene. The results revealed that a total of 126 (74.6%, 126/169) samples were positive for FCoV: 75.7% (87/115) of the FIP-suspected samples were positive for FCoV, and 72.2% (39/54) of the clinically healthy samples were positive for FCoV. Of the 126 FCoV-positive samples, 95 partial S genes were successfully sequenced. The partial S gene-based genotyping indicated that type I FCoV and type II FCoV accounted for 95.8% (91/95) and 4.2% (4/95), respectively. The partial S gene-based phylogenetic analyses showed that the 91 type I FCoV strains exhibited genetic diversity; the four type II FCoV strains exhibited a close relationship with type II FCoV strains from Taiwan. Three type I FCoV strains, HLJ/HRB/2016/10, HLJ/HRB/2016/11 and HLJ/HRB/2016/13, formed one potential new clade in the nearly complete genome-based phylogenetic trees. Further analysis revealed that FCoV infection appeared to be significantly correlated with a multi-cat environment (p < 0.01) and with age (p < 0.01). The S gene of the three type I FCoV strains identified in China, BJ/2017/27, BJ/2018/22 and XM/2018/04, exhibited a six nucleotide deletion (C

Indexed as

Genetic VariationAmino Acid SequenceAnimalsCatsChinaCoronavirus, FelineFeline Infectious PeritonitisFemaleMalePhylogenyPrevalenceSequence AlignmentSpike Glycoprotein, CoronavirusSpike Glycoprotein, Coronavirusfeline coronavirusfeline infectious peritonitisgenetic diversityphylogenetic analysisS gene

Identifiers

PMID30468573
PMCPMC7168551
OpenAlexW2901957993

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.