Evidence map›Paper›PMID 30468429›Full record

ArticleeLife2018

ASH1-catalyzed H3K36 methylation drives gene repression and marks H3K27me2/3-competent chromatin.

Vincent T Bicocca, Tereza Ormsby, Keyur K Adhvaryu, Shinji Honda, Eric U Selker

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
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  5. Article
  6. HISTONE DEACETYLASE-1 is required for epigenome stability inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Review
  8. Article
  9. Article
  10. The RPD3L deacetylation complex is required for facultative heterochromatin repression inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Histone deacetylation and cytosine methylation compartmentalize heterochromatic regions in the genome organization ofProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Ketone Bodies Preserve Mitochondria Through Epigenetics.JACC. Basic to translational science · 2023
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Vincent T BicoccaInstitute of Molecular Biology, University of Oregon, Eugene, United States.ORCID 0000-0002-5702-4586
Tereza OrmsbyDepartment of Biochemistry Faculty of Science, Charles University, Prague, Czech Republic.
Keyur K AdhvaryuSt. George's University School of Medicine, Grenada, Caribbean.
Shinji HondaFaculty of Medical Sciences, University of Fukui, Fukui, Japan.
Eric U SelkerInstitute of Molecular Biology, University of Oregon, Eugene, United States.ORCID 0000-0001-6465-0094
University of Oregon · USCharles University · CZSt. George's University · GDUniversity of Fukui · JP

Funding

Genetic Aspects of DNA MethylationR37GM035690 · NIGMS · UNIVERSITY OF OREGON · PI SELKER, ERIC U. · 2003 to 2012
$5.2M
GENETIC ASPECTS OF DNA METHYLATIONR01GM035690 · NIGMS · UNIVERSITY OF OREGON · PI SELKER, ERIC U. · 1986 to 2016
$3.3M
Control and function of heterochromatin in Neurospora crassaR35GM127142 · NIGMS · UNIVERSITY OF OREGON · PI SELKER, ERIC U. · 2018 to 2022
$2.6M
Control and Function of Histone H3 Lysine 27 Methylation in NeurosporaR01GM093061 · NIGMS · UNIVERSITY OF OREGON · PI SELKER, ERIC U. · 2012 to 2015
$1.1M
Characterization of SET-3 and its role in DNA methylationF32CA180468 · NCI · UNIVERSITY OF OREGON · PI BICOCCA, VINCENT T. · 2013 to 2016
$161k
NCI NIH HHS F32 CA180468NIGMS NIH HHS R01 GM035690NIGMS NIH HHS R01 GM093061NIGMS NIH HHS R35 GM127142NIGMS NIH HHS R37 GM035690NIH HHS CA180468NIH HHS GM035690NIH HHS GM093061NIH HHS GM127142
6 · The paper itself

Abstract

Methylation of histone H3 at lysine 36 (H3K36me), a widely-distributed chromatin mark, largely results from association of the lysine methyltransferase (KMT) SET-2 with RNA polymerase II (RNAPII), but most eukaryotes also have additional H3K36me KMTs that act independently of RNAPII. These include the orthologs of ASH1, which are conserved in animals, plants, and fungi but whose function and control are poorly understood. We found that

Indexed as

Epigenetic RepressionProtein Processing, Post-TranslationalChromatinHistone-Lysine N-MethyltransferaseHistonesLysineMethylationNeurospora crassaChromatinHistone-Lysine N-MethyltransferaseHistonesLysinechromosomesgene expressiongene silencinggeneticsgenomicsH3K27 methylationH3K36 methylationheterochromatinN. crassaSet2transcription

Identifiers

PMID30468429
PMCPMC6251624
OpenAlexW2901813409

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.