ArticleMolecular biology reports2019
Phylogenetic analysis of upland cotton MATE gene family reveals a conserved subfamily involved in transport of proanthocyanidins.
Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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Who cites it
17 citing papers in PubMed, 28 citations in OpenAlex.
- Genome-wide integrative dissection of genetic basis of fiber color and whiteness regulation in upland cotton (Gossypium hirsutum).BMC biology · 2026Article
- Genome-wide bioinformatics analysis of the MATE gene family for abiotic stress tolerance in sunflower (Helianthus annuus L.).PloS one · 2026Article
- Identification and functional analysis of a gene regulating tolerance to freezing in Brassica Napus L. seedlings using BSA-seq and RNA-seq.BMC plant biology · 2025Article
- Genome-Wide Identification, Expression Analysis under Abiotic Stress and Co-Expression Analysis ofInternational journal of molecular sciences · 2024Article
- Transcriptomic profiling analysis to identify genes associated with PA biosynthesis and insolubilization in the late stage of fruit development in C-PCNA persimmon.Scientific reports · 2022Article
- Biochemistry and Molecular Basis of Intracellular Flavonoid Transport in Plants.Plants (Basel, Switzerland) · 2022Review
- Transcriptome Analysis Reveals Differences in Anthocyanin Accumulation in Cotton (Frontiers in plant science · 2022Article
- A Systematic Phylogenomic Classification of the Multidrug and Toxic Compound Extrusion Transporter Gene Family in Plants.Frontiers in plant science · 2022Article
- Characterization and expression analysis of MATEs inFrontiers in plant science · 2022Article
- Global analysis of common bean multidrug and toxic compound extrusion transporters (PvMATEs): PvMATE8 and pinto bean seed coat darkening.Frontiers in plant science · 2022Article
- Genome-wide identification, characterization and expression analysis of MATE family genes in apple (Malus × domestica Borkh).BMC genomics · 2021Article
- Genome-Wide Identification of MATE Gene Family in Potato (Frontiers in genetics · 2021Article
- Plant Secondary Metabolite Transporters: Diversity, Functionality, and Their Modulation.Frontiers in plant science · 2021Review
- Genome-wide identification and expression analyses of nitrate transporter family genes in wild soybean (Glycine soja).Journal of applied genetics · 2020Article
- A Genome-Wide Survey of MATE Transporters in Brassicaceae and Unveiling Their Expression Profiles under Abiotic Stress in Rapeseed.Plants (Basel, Switzerland) · 2020Article
- A Genomic and Transcriptomic Overview of MATE, ABC, and MFS Transporters inPlants (Basel, Switzerland) · 2020Article
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10 authors at 1 institution in 1 country.
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Abstract
The multidrug and toxic compound extrusion (MATE) protein belongs to a secondary transporter family, which plays a role in transporting different kinds of substrates like phytohormones and secondary metabolites. In plant, MATE transporters related to the endogenous and exogenous mechanisms of detoxification for secondary metabolites such as alkaloids, flavonoids, anthocyanins and other secondary metabolites have been studied. However, a genome-wide analysis of the MATE family is rarely reported in upland cotton (Gossypium hirsutum L.). In the study, a total of 72 GhMATEs were identified from the genome of upland cotton, which were classified into four subfamilies with possible diverse functions such as transport of proanthocyanidins (PAs), accumulation of alkaloids, extrusion of xenobiotic compounds, regulation of disease resistance and response to abiotic stresses. Meanwhile, the gene structure, evolutionary relationship, physical location, conservative motifs, subcellular localization and gene expression pattern of GhMATEs have been further analysed. Three of these MATE genes (GhMATE12, GhMATE16 and GhMATE38) were identified as candidate genes due to their functions in transport of PA similar to GhTT12. These results provide a new perspective on upland cotton MATE gene family for their potential roles in transport of PA and a theoretical basis for further analyzing the function of MATE genes and improving the fiber quality of brown cotton.
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