Evidence map›Paper›PMID 30467661›Full record

ArticleExtremophiles : life under extreme conditions2019

Increase of positive supercoiling in a hyperthermophilic archaeon after UV irradiation.

A Gorlas, R Catchpole, E Marguet, P Forterre

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In one paragraph

Article in Extremophiles : life under extreme conditions, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

A GorlasLaboratoire de Biologie Cellulaire des Archaea, Institut de Biologie Intégrative de la Cellule, UMR8621/CNRS, 91405, Orsay Cedex, France. aurore.gorlas@i2bc.paris-saclay.fr.
R CatchpoleLaboratoire de Biologie Cellulaire des Archaea, Institut de Biologie Intégrative de la Cellule, UMR8621/CNRS, 91405, Orsay Cedex, France.
E MarguetLaboratoire de Biologie Cellulaire des Archaea, Institut de Biologie Intégrative de la Cellule, UMR8621/CNRS, 91405, Orsay Cedex, France.
P ForterreLaboratoire de Biologie Cellulaire des Archaea, Institut de Biologie Intégrative de la Cellule, UMR8621/CNRS, 91405, Orsay Cedex, France.

Funding

Agence Nationale de la Recherche project Thermovésicules / ANR 12-BSV3-003-01European Research Council project EVOMOBIL FP/2007-2013 / ERC GrantAgreement
6 · The paper itself

Abstract

Diverse DNA repair mechanisms are essential to all living organisms. Some of the most widespread repair systems allow recovery of genome integrity in the face of UV radiation. Here, we show that the hyperthermophilic archaeon Thermococcus nautili possesses a remarkable ability to recovery from extreme chromosomal damage. Immediately following UV irradiation, chromosomal DNA of T. nautili is fragmented beyond recognition. However, the extensive UV-induced double-stranded breaks (DSB) are repaired over the course of several hours, allowing restoration of growth. DSBs also disrupted plasmid DNA in this species. Similar to the chromosome, plasmid integrity was restored during an outgrowth period. Intriguingly, the topology of recovered pTN1 plasmids differed from control strain by being more positively supercoiled. As reverse gyrase (RG) is the only enzyme capable of inducing positive supercoiling, our results suggest the activation of RG activity by UV-induced stress. We suggest simple UV stress could be used to study archaeal DNA repair and responses to DSB.

Indexed as

Ultraviolet RaysArchaeal ProteinsDNA, ArchaealDNA Breaks, Double-StrandedDNA FragmentationDNA GyraseDNA RepairDNA, SuperhelicalPlasmidsThermococcusArchaeal ProteinsDNA, ArchaealDNA GyraseDNA, SuperhelicalDouble-strand breaksPlasmidTopologyUV irradiation

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.