ArticleScientific reports2018
Genome-wide analysis of RNAs associated with Populus euphratica Oliv. heterophyll morphogenesis.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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Who cites it
10 citing papers in PubMed, 16 citations in OpenAlex.
- Multi-omics analysis reveals spatiotemporal regulation and function of heteromorphic leaves in Populus.Plant physiology · 2023Article
- Transcriptomic Complexity of Culm Growth and Development in Different Types of Moso Bamboo.International journal of molecular sciences · 2023Review
- Identification, biogenesis, function, and mechanism of action of circular RNAs in plants.Plant communications · 2023Review
- Long Non-Coding RNAs: New Players in Plants.International journal of molecular sciences · 2022Review
- Identification and regulatory network analysis of SPL family transcription factors in Populus euphratica Oliv. heteromorphic leaves.Scientific reports · 2022Article
- Genetic Architecture of Heterophylly: Single and Multi-Leaf Genome-Wide Association Mapping inFrontiers in plant science · 2022Article
- Expression rewiring and methylation of non-coding RNAs involved in rhizome phenotypic variations of lotus ecotypes.Computational and structural biotechnology journal · 2022Article
- Progress in studying heteromorphic leaves inPlant signaling & behavior · 2021Review
- Genome-wide analyses across Viridiplantae reveal the origin and diversification of small RNA pathway-related genes.Communications biology · 2021Article
- Regulatory networks of circRNAs related to transcription factors in Populus euphratica Oliv. heteromorphic leaves.Bioscience reports · 2019Article
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Authors and funding
8 authors at 1 institution in 1 country.
Funding
Abstract
The desert plant Populus euphratica Oliv. has typical heterophylly; linear (Li), lanceolate (La), ovate (Ov) and broad-ovate (Bo) leaves grow in turn as trees develop to maturity. P. euphratica is therefore a potential model organism for leaf development. To investigate the roles of RNAs (including mRNAs, miRNAs, lncRNAs and circRNAs) in the morphogenesis of P. euphratica heterophylls, juvenile heterophylls were sampled individually, and then, the expression patterns of miRNAs, mRNAs, lncRNAs and circRNAs were analysed by small RNA sequencing and strand-specific RNA sequencing. We found that 1374 mRNAs, 19 miRNAs, 71 lncRNAs and 2 circRNAs were P. euphratica heterophyll morphogenesis-associated (PHMA) RNAs; among them, 17 PHMA miRNAs could alter the expression of 46 PHMA mRNAs. Furthermore, 11 lncRNAs and 2 circRNAs interacted with 27 PHMA mRNAs according to the ceRNA hypothesis. According to GO and KEGG pathway analysis, PHMA RNAs were mainly involved in metabolism, response to stimulus and developmental processes. Our results indicated that external environmental factors and genetic factors in P. euphratica co-regulated the expression of PHMA RNAs, repressed cell division, reinforced cell growth, and ultimately resulted in the morphogenesis of P. euphratica heterophylls.
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