Evidence map›Paper›PMID 30467127›Full record

ArticleEMBO molecular medicine2018

PARP-1 regulates DNA repair factor availability.

Matthew J Schiewer, Amy C Mandigo, Nicolas Gordon, Fangjin Huang, Sanchaika Gaur, Renée de Leeuw, Shuang G Zhao, Joseph Evans, Sumin Han, Theodore Parsons and 22 more

Open access · goldAbstract read
In one paragraph

Article in EMBO molecular medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it, 78 citations in OpenAlex.

  1. Pooled it
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  7. Targeting PANoptosis: a promising therapeutic strategy for ALI/ARDS.Apoptosis : an international journal on programmed cell death · 2025
    Review
  8. Article
  9. BRCA2 reversion mutation-independent resistance to PARP inhibition through impaired DNA prereplication complex function.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 7 institutions in 2 countries.

Matthew J SchiewerDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA karen.knudsen@jefferson.edu.
Amy C MandigoDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Nicolas GordonDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Fangjin HuangCedars-Sinai Medical Center, Los Angeles, CA, USA.
Sanchaika GaurCedars-Sinai Medical Center, Los Angeles, CA, USA.
Renée de LeeuwDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Shuang G ZhaoDepartment of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA.
Joseph EvansDepartment of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA.
Sumin HanDepartment of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA.
Theodore ParsonsSidney Kimmel Cancer Center Thomas Jefferson University, Philadelphia, PA, USA.
Ruth BirbeCooper University Health, Camden, NJ, USA.
Peter McCueSidney Kimmel Cancer Center Thomas Jefferson University, Philadelphia, PA, USA.
Christopher McNairDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Saswati N ChandDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Ylenia Cendon-FlorezDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Peter GallagherDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Jennifer J McCannDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Neermala Poudel NeupaneDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Ayesha A ShafiDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Emanuela DylgjeriDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Lucas J BrandDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Tapio VisakorpiUniversity of Tampere, Tampere, Finland.
Ganesh V RajUT Southwestern, Dallas, TX, USA.
Costas D LallasSidney Kimmel Cancer Center Thomas Jefferson University, Philadelphia, PA, USA.
Edouard J TrabulsiSidney Kimmel Cancer Center Thomas Jefferson University, Philadelphia, PA, USA.
Leonard G GomellaSidney Kimmel Cancer Center Thomas Jefferson University, Philadelphia, PA, USA.
Adam P DickerSidney Kimmel Cancer Center Thomas Jefferson University, Philadelphia, PA, USA.
Wm Kevin KellySidney Kimmel Cancer Center Thomas Jefferson University, Philadelphia, PA, USA.
Benjamin E LeibySidney Kimmel Cancer Center Thomas Jefferson University, Philadelphia, PA, USA.
Beatrice KnudsenCedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID 0000-0002-1301-890X
Felix Y FengDepartments of Radiation Oncology, Urology, and Medicine, University of California, San Francisco, San Francisco, CA, USA.
Karen E KnudsenDepartment of Cancer Biology, Thomas Jefferson University, Philadelphia, PA, USA.
Thomas Jefferson University · USCedars-Sinai Medical Center · USUniversity of Michigan · USCooper University Health Care · USSouthwestern Medical Center · USTampere University · FIUniversity of California, San Francisco · US

Funding

X-Ray Crystallography and Macromolecular CharacterizationP30CA056036 · NCI · THOMAS JEFFERSON UNIVERSITY · PI Andrew Chapman · 1995 to 2026
$94.8M
USP22 Function in Advanced Prostate CancerR01CA182569 · NCI · THOMAS JEFFERSON UNIVERSITY · PI KNUDSEN, KAREN E, MCMAHON, STEVEN B. · 2015 to 2019
$2.4M
RB Function in Prostate Cancer ProgressionR01CA176401 · NCI · THOMAS JEFFERSON UNIVERSITY · PI KNUDSEN, KAREN E · 2014 to 2018
$2.2M
Targeting Cell Cycle Alterations to Improve Treatment for Advanced Prostate CancerR01CA217329 · NCI · THOMAS JEFFERSON UNIVERSITY · PI KELLY, WILLIAM K., MCNAIR, CHRISTOPHER MICHAEL · 2017 to 2021
$1.8M
SWI/SNF dysregulation in development and diseaseR01CA159945 · NCI · THOMAS JEFFERSON UNIVERSITY · PI KNUDSEN, KAREN E · 2012 to 2016
$1.6M
NCI NIH HHS P30 CA056036NCI NIH HHS R01 CA159945NCI NIH HHS R01 CA176401NCI NIH HHS R01 CA182569NCI NIH HHS R01 CA217329
6 · The paper itself

Abstract

PARP-1 holds major functions on chromatin, DNA damage repair and transcriptional regulation, both of which are relevant in the context of cancer. Here, unbiased transcriptional profiling revealed the downstream transcriptional profile of PARP-1 enzymatic activity. Further investigation of the PARP-1-regulated transcriptome and secondary strategies for assessing PARP-1 activity in patient tissues revealed that PARP-1 activity was unexpectedly enriched as a function of disease progression and was associated with poor outcome independent of DNA double-strand breaks, suggesting that enhanced PARP-1 activity may promote aggressive phenotypes. Mechanistic investigation revealed that active PARP-1 served to enhance E2F1 transcription factor activity, and specifically promoted E2F1-mediated induction of DNA repair factors involved in homologous recombination (HR). Conversely, PARP-1 inhibition reduced HR factor availability and thus acted to induce or enhance "BRCA-ness". These observations bring new understanding of PARP-1 function in cancer and have significant ramifications on predicting PARP-1 inhibitor function in the clinical setting.

Indexed as

DNA RepairAnimalsCell LineDisease ProgressionE2F1 Transcription FactorGene Expression ProfilingHomologous RecombinationHumansImmunohistochemistryMaleMice, Inbred BALB CPoly (ADP-Ribose) Polymerase-1Prostatic NeoplasmsTissue Array AnalysisE2F1 protein, humanE2F1 Transcription FactorPARP1 protein, humanPoly (ADP-Ribose) Polymerase-1DNA repairE2F1PARPtranscription

Identifiers

PMID30467127
PMCPMC6284389
OpenAlexW2900491285

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.