Evidence map›Paper›PMID 30465522›Full record

ArticleeLife2018

Metazoan evolution of glutamate receptors reveals unreported phylogenetic groups and divergent lineage-specific events.

David Ramos-Vicente, Jie Ji, Esther Gratacòs-Batlle, Gemma Gou, Rita Reig-Viader, Javier Luís, Demian Burguera, Enrique Navas-Perez, Jordi García-Fernández, Pablo Fuentes-Prior and 4 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 62 citations in OpenAlex.

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  11. The open gate of the AMPA receptor forms a CaNature structural & molecular biology · 2024
    Article
  12. Loss of activation by GABA in vertebrate delta ionotropic glutamate receptors.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Article
  14. Review
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  18. Homecoming of the estranged GluD channels.Trends in neurosciences · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

David Ramos-VicenteMolecular Physiology of the Synapse Laboratory, Biomedical Research Institute Sant Pau, Barcelona, Spain.ORCID http://orcid.org/0000-0002-2730-0850
Jie JiInstitute of Biotechnology and Biomedicine, Department of Cell Biology, Animal Physiology and Immunology, Universitat Autònoma de Barcelona, Barcelona, Spain.
Esther Gratacòs-BatlleNeurophysiology Laboratory, Department of Biomedicine, Medical School, August Pi i Sunyer Biomedical Research Institute, Institute of Neurosciences, Universitat de Barcelona, Barcelona, Spain.
Gemma GouMolecular Physiology of the Synapse Laboratory, Biomedical Research Institute Sant Pau, Barcelona, Spain.
Rita Reig-ViaderMolecular Physiology of the Synapse Laboratory, Biomedical Research Institute Sant Pau, Barcelona, Spain.
Javier LuísMolecular Physiology of the Synapse Laboratory, Biomedical Research Institute Sant Pau, Barcelona, Spain.
Demian BurgueraDepartment of Genetics, School of Biology, Institut de Biomedicina, University of Barcelona, Barcelona, Spain.
Enrique Navas-PerezDepartment of Genetics, School of Biology, Institut de Biomedicina, University of Barcelona, Barcelona, Spain.
Jordi García-FernándezDepartment of Genetics, School of Biology, Institut de Biomedicina, University of Barcelona, Barcelona, Spain.
Pablo Fuentes-PriorMolecular Bases of Disease, Biomedical Research Institute Sant Pau, Hospital de la Santa Creu i Sant Pau, Barcelona, Spain.
Hector EscrivaSorbonne Université, CNRS, Biologie Intégrative des Organismes Marins, Banyuls-sur-Mer, France.
Nerea RoherInstitute of Biotechnology and Biomedicine, Department of Cell Biology, Animal Physiology and Immunology, Universitat Autònoma de Barcelona, Barcelona, Spain.
David SotoNeurophysiology Laboratory, Department of Biomedicine, Medical School, August Pi i Sunyer Biomedical Research Institute, Institute of Neurosciences, Universitat de Barcelona, Barcelona, Spain.ORCID http://orcid.org/0000-0001-7995-3805
Àlex BayésMolecular Physiology of the Synapse Laboratory, Biomedical Research Institute Sant Pau, Barcelona, Spain.ORCID http://orcid.org/0000-0002-5265-6306
Universitat Autònoma de Barcelona · ESUniversitat de Barcelona · ESCentre National de la Recherche Scientifique · FRHospital de Sant Pau · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutamate receptors are divided in two unrelated families: ionotropic (iGluR), driving synaptic transmission, and metabotropic (mGluR), which modulate synaptic strength. The present classification of GluRs is based on vertebrate proteins and has remained unchanged for over two decades. Here we report an exhaustive phylogenetic study of GluRs in metazoans. Importantly, we demonstrate that GluRs have followed different evolutionary histories in separated animal lineages. Our analysis reveals that the present organization of iGluRs into six classes does not capture the full complexity of their evolution. Instead, we propose an organization into four subfamilies and ten classes, four of which have never been previously described. Furthermore, we report a sister class to mGluR classes I-III, class IV. We show that many unreported proteins are expressed in the nervous system, and that new Epsilon receptors form functional ligand-gated ion channels. We propose an updated classification of glutamate receptors that includes our findings.

Indexed as

Evolution, MolecularGenetic VariationAmino Acid SequenceAnimalsBayes TheoremBinding SitesHEK293 CellsHumansModels, MolecularPhylogenyProtein DomainsReceptors, Ionotropic GlutamateReceptors, Metabotropic GlutamateSequence Homology, Amino AcidReceptors, Ionotropic GlutamateReceptors, Metabotropic Glutamateamphioxuselectrophysiologyevolutionary biologygene expressionionotropic glutamate receptorsmetabotropic glutamate receptorsneurosciencephylogenetics

Identifiers

PMID30465522
PMCPMC6307864
OpenAlexW2901272272

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.