Evidence map›Paper›PMID 30465139›Full record

ArticleFunctional & integrative genomics2019

Quantitative proteomic analysis reveals novel stress-associated active proteins (SAAPs) and pathways involved in modulating tolerance of wheat under terminal heat.

Ranjeet R Kumar, Khushboo Singh, Sumedha Ahuja, Mohd Tasleem, Indra Singh, Sanjeev Kumar, Monendra Grover, Dwijesh Mishra, Gyanendra K Rai, Suneha Goswami and 4 more

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Article in Functional & integrative genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

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17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Transcriptome Analysis ofInternational journal of molecular sciences · 2023
    Article
  5. Wheat Omics: Advancements and Opportunities.Plants (Basel, Switzerland) · 2023
    Review
  6. Review
  7. Review
  8. Review
  9. Review
  10. Review
  11. Review
  12. Characterizing the putative mitogen-activated protein kinase (Biotechnology reports (Amsterdam, Netherlands) · 2021
    Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Article
4 · The record

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5 · Who and what money

Authors and funding

14 authors.

Ranjeet R KumarDivision of Biochemistry, Indian Agricultural Research Institute, New Delhi, 110012, India. ranjeetranjaniari@gmail.com.ORCID http://orcid.org/0000-0002-2279-6340
Khushboo SinghDivision of Biochemistry, Indian Agricultural Research Institute, New Delhi, 110012, India.
Sumedha AhujaDivision of Biochemistry, Indian Agricultural Research Institute, New Delhi, 110012, India.
Mohd TasleemDivision of Biochemistry, Indian Agricultural Research Institute, New Delhi, 110012, India.
Indra SinghCABin, Indian Agricultural Statistical Research Institute (IASRI), Pusa, New Delhi, 110012, India.
Sanjeev KumarCABin, Indian Agricultural Statistical Research Institute (IASRI), Pusa, New Delhi, 110012, India.
Monendra GroverCABin, Indian Agricultural Statistical Research Institute (IASRI), Pusa, New Delhi, 110012, India.
Dwijesh MishraCABin, Indian Agricultural Statistical Research Institute (IASRI), Pusa, New Delhi, 110012, India.
Gyanendra K RaiSher-E-Kashmir University of Agriculture Science and Technology, Chatta, Jammu and Kashmir, 180009, India.
Suneha GoswamiDivision of Biochemistry, Indian Agricultural Research Institute, New Delhi, 110012, India.
Gyanendra P SinghIndian Institute of Wheat and Barley Research, Karnal, Haryana, 132001, India.
Viswanathan ChinnusamyDivision of Plant Physiology, Indian Agricultural Research Institute, New Delhi, 110012, India.
Anil RaiCABin, Indian Agricultural Statistical Research Institute (IASRI), Pusa, New Delhi, 110012, India.
Shelly PraveenDivision of Biochemistry, Indian Agricultural Research Institute, New Delhi, 110012, India. shellypraveen@hotmail.com.

Funding

Indian Council of Agricultural Research (21-56) TG3064Indian Council of Agricultural Research TG3079
6 · The paper itself

Abstract

Terminal heat stress has detrimental effect on the growth and yield of wheat. Very limited information is available on heat stress-associated active proteins (SAAPs) in wheat. Here, we have identified 159 protein groups with 4271 SAAPs in control (22 ± 3 °C) and HS-treated (38 °C, 2 h) wheat cvs. HD2985 and HD2329 using iTRAQ. We identified 3600 proteins to be upregulated and 5825 proteins to be downregulated in both the wheat cvs. under HS. We observed 60.3% of the common SAAPs showing upregulation in HD2985 (thermotolerant) and downregulation in HD2329 (thermosusceptible) under HS. GO analysis showed proton transport (molecular), photosynthesis (biological), and ATP binding (cellular) to be most altered under HS. Most of the SAAPs identified were observed to be chloroplast localized and involved in photosynthesis. Carboxylase enzyme was observed most abundant active enzymes in wheat under HS. An increase in the degradative isoenzymes (α/β-amylases) was observed, as compared to biosynthesis enzymes (ADP-glucophosphorylase, soluble starch synthase, etc.) under HS. Transcript profiling showed very high relative fold expression of HSP17, CDPK, Cu/Zn SOD, whereas downregulation of AGPase, SSS under HS. The identified SAAPs can be used for targeted protein-based precision wheat-breeding program for the development of 'climate-smart' wheat.

Indexed as

Gene Expression Regulation, PlantHeat-Shock ResponseThermotolerancePlant ProteinsProteomeTranscriptomeTriticumPlant ProteinsProteome2-DEAGPaseAmylasesCDPKDEGsDeveloping grainsEndospermic tissueHSP17ImmunoblottingiTRAQMALDIPhotosynthesisProteomicqRT-PCRRuBisCoSAAPsSAGsSoluble starch synthaseSource/sink ratioStarch biosynthesis pathwaySucrose synthaseTerminal HSThermotoleranceWheat

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.