Evidence map›Paper›PMID 30465063›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2019

Fine mapping of qGL5H, a major grain length locus in barley (Hordeum vulgare L.).

Calum Watt, Gaofeng Zhou, Lee-Anne McFawn, Kenneth James Chalmers, Chengdao Li

Abstract read
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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Genome-wide association studies reveal novel loci for grain size in two-rowed barley (Hordeum vulgare L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  4. Article
  5. Article
  6. Genetic Localization and Homologous Genes Mining for Barley Grain Size.International journal of molecular sciences · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Fine mapping qGL2H, a major locus controlling grain length in barley (Hordeum vulgare L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Calum WattWestern Barley Genetic Alliance, Murdoch University, Perth, WA, Australia.ORCID http://orcid.org/0000-0003-2836-8168
Gaofeng ZhouWestern Barley Genetic Alliance, Murdoch University, Perth, WA, Australia.
Lee-Anne McFawnWestern Barley Genetic Alliance, Murdoch University, Perth, WA, Australia.
Kenneth James ChalmersSchool of Agriculture, Food and Wine, University of Adelaide, Adelaide, SA, Australia.
Chengdao LiWestern Barley Genetic Alliance, Murdoch University, Perth, WA, Australia. C.li@murdoch.edu.au.

Funding

Grains Research and Development Corporation UMU00049
6 · The paper itself

Abstract

key messageA major grain length QTL on chromosome 5H was fine mapped from 180.5 to 1.7 Mb. Quantitative trait loci (QTLs) mapping has been used extensively in barley to detect QTLs that underlie complex traits such as grain size. In the present study, we utilised 312 double haploid lines derived from a cross between two Australian malting varieties, Vlamingh and Buloke, to dissect the genetic control of a number of grain size characteristics. Digital image analysis was used to measure grain size characteristics including length, width, thickness and plumpness which are important traits influencing barley yield and grain physical quality. Using data from four independent environments and molecular marker genotype data, we identified 23 significant QTLs for these four traits, ten of which were consensus QTLs and identified in two or more environments. A QTL region on chromosome 5H designated qGL5H that was associated with grain size was fine mapped to a 1.7 Mb interval. qGL5H was able to explain 21.6% of phenotypic variation for grain length within the population. This major QTL is an appropriate candidate for further genetic dissection.

Indexed as

Chromosomes, PlantGenes, PlantGenomicsGenotypeHordeumPhenotypePhysical Chromosome MappingPrincipal Component AnalysisQuantitative Trait LociSeeds

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.