Evidence map›Paper›PMID 30464261›Full record

ArticleScientific reports2018

COMP and TSP-4 interact specifically with the novel GXKGHR motif only found in fibrillar collagens.

Jan M Gebauer, Anna Köhler, Helen Dietmar, Monika Gompert, Ines Neundorf, Frank Zaucke, Manuel Koch, Ulrich Baumann

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Pathophysiological roles of thrombospondin-4 in disease development.Seminars in cell & developmental biology · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Reversible Covalent End-Capping of Collagen Model Peptides.Chemistry (Weinheim an der Bergstrasse, Germany) · 2019
    Article
  13. Thrombospondin 1 and Its Diverse Roles as a Regulator of Extracellular Matrix in Fibrotic Disease.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2019
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Jan M GebauerInstitute of Biochemistry, University of Cologne, Cologne, Germany. jan.gebauer@uni-koeln.de.ORCID http://orcid.org/0000-0002-3989-4748
Anna KöhlerCenter for Biochemistry, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany.
Helen DietmarCenter for Biochemistry, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany.
Monika GompertInstitute of Biochemistry, University of Cologne, Cologne, Germany.
Ines NeundorfInstitute of Biochemistry, University of Cologne, Cologne, Germany.ORCID http://orcid.org/0000-0001-6450-3991
Frank ZauckeCenter for Biochemistry, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany.ORCID http://orcid.org/0000-0002-7680-9354
Manuel KochCenter for Biochemistry, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany.ORCID http://orcid.org/0000-0002-2962-7814
Ulrich BaumannInstitute of Biochemistry, University of Cologne, Cologne, Germany.ORCID http://orcid.org/0000-0003-0383-0168
University of Cologne · DE

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) FOR 2722Deutsche Forschungsgemeinschaft (German Research Foundation) SFB829/B11
6 · The paper itself

Abstract

COMP (cartilage oligomeric matrix protein) is a member of the thrombospondin family and forms homopentamers as well as mixed heterooligomers with its closely related family member TSP-4. COMP is long known to bind to collagens and to influence collagen fibril formation. Recent work indicates that already intracellular interaction with collagen is important for collagen secretion. However, the exact binding site of COMP on the collagen triple helix has not been described up to now. In this study we have identified a GXKGHR motif on the collagen II helix to bind to COMP, using a recombinantly expressed collagen II peptide library. This binding sequence is conserved throughout evolution and we demonstrate that TSP-4 binds to the same sequence. The identified binding motif overlaps with the recognition sites of many other collagen-binding partners (e.g. PEDF, Heparin) and also spans the lysine residues, which form collagen cross-links. COMP might thereby protect collagen helices from premature modification and cross-linking. Interestingly, this motif is only found in classical fibrillar collagens, although COMP is known to also bind other types. This might indicate that COMP has a unique interface for fibrillar collagens, thus making it an interesting target for the development of antifibrotic drugs.

Indexed as

Protein Interaction MappingAmino Acid MotifsBinding SitesCartilage Oligomeric Matrix ProteinFibrillar CollagensProtein BindingThrombospondinsCartilage Oligomeric Matrix ProteinFibrillar Collagensthrombospondin 4ThrombospondinsTSP5 protein, human

Identifiers

PMID30464261
PMCPMC6249252
OpenAlexW2901204902

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.