Evidence map›Paper›PMID 30463972›Full record

ArticleJournal of virology2019

A Novel Type of Influenza A Virus-Derived Defective Interfering Particle with Nucleotide Substitutions in Its Genome.

Sascha Young Kupke, Dietmar Riedel, Timo Frensing, Pawel Zmora, Udo Reichl

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it, 52 citations in OpenAlex.

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  19. A Virus Is a Community: Diversity within Negative-Sense RNA Virus Populations.Microbiology and molecular biology reviews : MMBR · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sascha Young KupkeMax Planck Institute for Dynamics of Complex Technical Systems, Department of Bioprocess Engineering, Magdeburg, Germany kupke@mpi-magdeburg.mpg.de.ORCID 0000-0003-3943-9718
Dietmar RiedelMax Planck Institute for Biophysical Chemistry, Facility for Transmission Electron Microscopy, Göttingen, Germany.
Timo FrensingMax Planck Institute for Dynamics of Complex Technical Systems, Department of Bioprocess Engineering, Magdeburg, Germany.
Pawel ZmoraMax Planck Institute for Dynamics of Complex Technical Systems, Department of Bioprocess Engineering, Magdeburg, Germany.
Udo ReichlMax Planck Institute for Dynamics of Complex Technical Systems, Department of Bioprocess Engineering, Magdeburg, Germany.
Max Planck Institute for Dynamics of Complex Technical Systems · DEMax Planck Institute for Biophysical Chemistry · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Defective interfering particles (DIPs) replicate at the expense of coinfecting, fully infectious homologous virus. Typically, they contain a highly deleted form of the viral genome. Utilizing single-cell analysis, here we report the discovery of a yet-unknown DIP type, derived from influenza A viruses (IAVs), termed OP7 virus. Instead of deletions, the genomic viral RNA (vRNA) of segment 7 (S7) carried 37 point mutations compared to the reference sequence, affecting promoter regions, encoded proteins, and genome packaging signals. Coinfection experiments demonstrated strong interference of OP7 virus with IAV replication, manifested by a dramatic decrease in the infectivity of released virions. Moreover, an overproportional quantity of S7 in relation to other genome segments was observed, both intracellularly and in the released virus population. Concurrently, OP7 virions lacked a large fraction of other vRNA segments, which appears to constitute its defect in virus replication. OP7 virus might serve as a promising candidate for antiviral therapy. Furthermore, this novel form of DIP may also be present in other IAV preparations.

Indexed as

A549 CellsAnimalsAntiviral AgentsDefective VirusesDogsGenome, ViralHEK293 CellsHumansInfluenza A virusMadin Darby Canine Kidney CellsNucleotidesRNA, ViralVirionVirus ReplicationAntiviral AgentsNucleotidesRNA, Viraldefective interfering particlesinfluenza A virussingle-cell analysis

Identifiers

PMID30463972
PMCPMC6364022
OpenAlexW2901514971

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.