Evidence map›Paper›PMID 30463206›Full record

ArticleViruses2018

Pathobiological and Genomic Characterization of a Cold-Adapted Infectious Bronchitis Virus (BP-caKII).

Seung-Min Hong, Se-Hee An, Chung-Young Lee, Chang-Seon Song, Kang-Seuk Choi, Jae-Hong Kim, Hyuk-Joon Kwon

Abstract read
In one paragraph

Article in Viruses, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Seung-Min HongLaboratory of Avian Diseases, College of Veterinary Medicine, Seoul National University, Seoul 08826, Korea. topkin@snu.ac.kr.
Se-Hee AnLaboratory of Avian Diseases, College of Veterinary Medicine, Seoul National University, Seoul 08826, Korea. eepdl1201@snu.ac.kr.
Chung-Young LeeLaboratory of Avian Diseases, College of Veterinary Medicine, Seoul National University, Seoul 08826, Korea. bluespell@snu.ac.kr.
Chang-Seon SongLaboratory of Avian Diseases, College of Veterinary Medicine, Konkuk University, Seoul 05029, Korea. songcs@konkuk.ac.kr.
Kang-Seuk ChoiAvian Disease Division, animal and Plant Quarantine Agency, Gimcheon, Gyeongsangbuk-Do 39660, Korea. kchoi0608@korea.kr.ORCID 0000-0001-6825-6924
Jae-Hong KimLaboratory of Avian Diseases, College of Veterinary Medicine, Seoul National University, Seoul 08826, Korea. kimhong@snu.ac.kr.
Hyuk-Joon KwonReseach Institute for Veterinary Science, College of Veterinary Medicine, BK21 for Veterinary Science, Seoul 08826, Korea. kwonhj01@snu.ac.kr.ORCID 0000-0001-9107-7860

Funding

Ames Research Center NASA 2018
6 · The paper itself

Abstract

We established a cold-adapted infectious bronchitis virus (BP-caKII) by passaging a field virus through specific pathogen-free embryonated eggs 20 times at 32 °C. We characterized its growth kinetics and pathogenicity in embryonated eggs, and its tropism and persistence in different tissues from chickens; then, we evaluated pathogenicity by using a new premature reproductive tract pathogenicity model. Furthermore, we determined the complete genomic sequence of BP-caKII to understand the genetic changes related to cold adaptation. According to our results, BP-caKII clustered with the KII genotype viruses K2 and KM91, and showed less pathogenicity than K2, a live attenuated vaccine strain. BP-caKII showed delayed viremia, resulting in its delayed dissemination to the kidneys and cecal tonsils compared to K2 and KM91, the latter of which is a pathogenic field strain. A comparative genomics study revealed similar nucleotide sequences between BP-caKII, K2 and KM91 but clearly showed different mutations among them. BP-caKII shared several mutations with K2 (nsp13, 14, 15 and 16) following embryo adaptation but acquired multiple additional mutations in nonstructural proteins (nsp3, 4 and 12), spike proteins and nucleocapsid proteins following cold adaptation. Thus, the establishment of BP-caKII and the identified mutations in this study may provide insight into the genetic background of embryo and cold adaptations, and the attenuation of coronaviruses.

Indexed as

Adaptation, BiologicalAnimalsChick EmbryoChickensCold TemperatureCoronavirus InfectionsGenomicsInfectious bronchitis virusMutationPoultry DiseasesSerial PassageWhole Genome Sequencingcold adaptationcomparative genomicsinfectious bronchitis viruspersistent infectionpremature reproductive tract pathogenicity model

Identifiers

PMID30463206
PMCPMC6266813

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.