Evidence map›Paper›PMID 30462694›Full record

ArticlePloS one2018

Genetic diversity and population structure of Haloxylon salicornicum moq. in Kuwait by ISSR markers.

Fadila Al Salameen, Nazima Habibi, Vinod Kumar, Sami Al Amad, Jamal Dashti, Lina Talebi, Bashayer Al Doaij

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Seed or soil: Tracing back the plant mycobiota primary sources.Environmental microbiology reports · 2024
    Article
  3. Geographical variation and genetic diversity ofFrontiers in plant science · 2024
    Article
  4. Genome survey and genetic characterization ofFrontiers in plant science · 2023
    Article
  5. Article
  6. Article
  7. Genetic Diversity ofPlants (Basel, Switzerland) · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Transferability of ISSR, SCoT and SSR Markers forPlants (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fadila Al SalameenBiotechnology Program, Environment and Life Sciences Research Centre, Kuwait Institute for Scientific Research, Shuwaikh, Kuwait.ORCID 0000-0002-4826-3753
Nazima HabibiBiotechnology Program, Environment and Life Sciences Research Centre, Kuwait Institute for Scientific Research, Shuwaikh, Kuwait.ORCID 0000-0003-0752-4774
Vinod KumarBiotechnology Program, Environment and Life Sciences Research Centre, Kuwait Institute for Scientific Research, Shuwaikh, Kuwait.
Sami Al AmadBiotechnology Program, Environment and Life Sciences Research Centre, Kuwait Institute for Scientific Research, Shuwaikh, Kuwait.
Jamal DashtiDesert, Agriculture & Ecosystems Program, Environment and Life Sciences Research Centre, Kuwait Institute for Scientific Research, Shuwaikh, Kuwait.
Lina TalebiEnvironment Pollution and Climate Change Program, Environment and Life Sciences Research Centre, Kuwait Institute for Scientific Research, Shuwaikh, Kuwait.
Bashayer Al DoaijBiotechnology Program, Environment and Life Sciences Research Centre, Kuwait Institute for Scientific Research, Shuwaikh, Kuwait.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Haloxylon salicornicum moq. Bunge ex Boiss (Rimth) is one of the native plants of Kuwait, extensively depleting through the anthropogenic activities. It is important to conserve Haloxylon community in Kuwait as it can tolerate extreme adverse conditions of drought and salinity to be potentially used in the desert and urban revegetation and greenery national programs. Therefore, a set of 16 inter simple sequence repeat (ISSR) markers were used to assess genetic diversity and population structure of 108 genotypes from six locations in Kuwait. The ISSR primers produced 195 unambiguous and reproducible bands out of which 167 bands were polymorphic (86.5%) with a mean PIC value of 0.31. The overall average values of Nei's gene diversity (h') and Shannon's diversity index (I) were 0.254 and 0.375, respectively. Results of AMOVA revealed high genetic variations within populations (77.8%) and low among populations (22%). The values of Fixation index (FST = 0.22; P = 0.0), Genetic differentiation (GST = 0.262; G'ST = 0.327; D = 0.335 and Gene flow (NM = 0.880) were indicative of heterozygous populations. The results of STRUCTURE and split decomposition analysis suggested that the Rimth accessions of Kuwait can be grouped into five and six subpopulations, respectively. Principal coordinate analysis (PCoA) grouped them into three clusters. The pairwise Nei's genetic distances (DS) among populations demonstrated a narrow range from 0.047 to 0.187 (Scale-0.0 to 1.0). The Mantel's test revealed a weak correlation (r2- 0.188; P-0.013) between the genetic distance and geographic distances. Our results suggest that the narrowly distributed Haloxylon community in Kuwait demonstrated a high genetic diversity within the populations however the overall population structure was weak.

Indexed as

Genetic VariationMicrosatellite RepeatsCaryophyllalesKuwait

Identifiers

PMID30462694
PMCPMC6248962

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.