Evidence map›Paper›PMID 30462199›Full record

ArticleInternational journal of epidemiology2019

Detecting and correcting for bias in Mendelian randomization analyses using Gene-by-Environment interactions.

Wes Spiller, David Slichter, Jack Bowden, George Davey Smith

Abstract read
In one paragraph

Article in International journal of epidemiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 2 syntheses or guidelines pooled it.

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  18. Gene-environment interactions in human health.Nature reviews. Genetics · 2024
    Review
  19. Letter to the editor Regarding 'Causal relationship between basal metabolic rate and intervertebral disc degeneration: a Mendelian randomization study' by Liu Z, et al. (Eur Spine J. 2024 Jun 24. Doi: 10.1007/s00586-024-08367-7).European spine journal : official publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Wes SpillerPopulation Health Sciences, University of Bristol, Bristol, UK.
David SlichterDepartment of Economics, Binghamton University, State University of New York, Binghamton, NY, USA.
Jack BowdenPopulation Health Sciences, University of Bristol, Bristol, UK.
George Davey SmithPopulation Health Sciences, University of Bristol, Bristol, UK.

Funding

Medical Research Council MC_PC_17228Medical Research Council MC_QA137853Medical Research Council MC_UU_00011/1Medical Research Council MC_UU_00011/2Wellcome Trust 108902/B/15/Z
6 · The paper itself

Abstract

backgroundMendelian randomization (MR) has developed into an established method for strengthening causal inference and estimating causal effects, largely due to the proliferation of genome-wide association studies. However, genetic instruments remain controversial, as horizontal pleiotropic effects can introduce bias into causal estimates. Recent work has highlighted the potential of gene-environment interactions in detecting and correcting for pleiotropic bias in MR analyses.

methodsWe introduce MR using Gene-by-Environment interactions (MRGxE) as a framework capable of identifying and correcting for pleiotropic bias. If an instrument-covariate interaction induces variation in the association between a genetic instrument and exposure, it is possible to identify and correct for pleiotropic effects. The interpretation of MRGxE is similar to conventional summary MR approaches, with a particular advantage of MRGxE being the ability to assess the validity of an individual instrument.

resultsWe investigate the effect of adiposity, measured using body mass index (BMI), upon systolic blood pressure (SBP) using data from the UK Biobank and a single weighted allelic score informed by data from the GIANT consortium. We find MRGxE produces findings in agreement with two-sample summary MR approaches. Further, we perform simulations highlighting the utility of the approach even when the MRGxE assumptions are violated.

conclusionsBy utilizing instrument-covariate interactions in MR analyses implemented within a linear-regression framework, it is possible to identify and correct for horizontal pleiotropic bias, provided the average magnitude of pleiotropy is constant across interaction-covariate subgroups.

Indexed as

Gene-Environment InteractionMendelian Randomization AnalysisAdiposityBiasBiological Specimen BanksBlood PressureBody Mass IndexComputer SimulationGenetic PleiotropyHumansObesitygene–environment interactioninvalid instrumentsMendelian randomizationMRGxEpleiotropy

Identifiers

PMID30462199
PMCPMC6659360

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.