Evidence map›Paper›PMID 30461222›Full record

ArticleCurrent protocols in nucleic acid chemistry2019

Label-Free Electrophoretic Mobility Shift Assay (EMSA) for Measuring Dissociation Constants of Protein-RNA Complexes.

Minguk Seo, Li Lei, Martin Egli

Abstract read
In one paragraph

Article in Current protocols in nucleic acid chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 43 citations in OpenAlex.

  1. Investigating Potential 5' UTR G-Quadruplexes Within NRF2 mRNA.Current issues in molecular biology · 2026
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  2. miR398-SlCSD1 module participates in the SA-HJournal of advanced research · 2026
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  8. Journal of virology · 2024
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  11. DNA polymerase delta governs parental histone transfer to DNA replication lagging strand.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  15. Article
  16. A SYBR Gold-based Label-freeBio-protocol · 2022
    Article
  17. Article
  18. Amino Acid Composition in Various Types of Nucleic Acid-Binding Proteins.International journal of molecular sciences · 2021
    Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Minguk SeoDepartment of Biochemistry, School of Medicine, Vanderbilt University, Nashville, Tennessee.
Li LeiDepartment of Biochemistry, School of Medicine, Vanderbilt University, Nashville, Tennessee.
Martin EgliDepartment of Biochemistry, School of Medicine, Vanderbilt University, Nashville, Tennessee.
Vanderbilt University · US

Funding

Amide-Modified RNA: Synthesis, Structure and Potential for RNA InterferenceR01GM071461 · NIGMS · STATE UNIVERSITY OF NY,BINGHAMTON · PI ROZNERS, ERIKS · 2007 to 2017
$3.2M
NIGMS NIH HHS R01 GM071461
6 · The paper itself

Abstract

The electrophoretic mobility shift assay (EMSA) is a well-established method to detect formation of complexes between proteins and nucleic acids and to determine, among other parameters, equilibrium constants for the interaction. Mixtures of protein and nucleic acid solutions of various ratios are analyzed via polyacrylamide gel electrophoresis (PAGE) under native conditions. In general, protein-nucleic acid complexes will migrate more slowly than the free nucleic acid. From the distributions of the nucleic acid components in the observed bands in individual gel lanes, quantitative parameters such as the dissociation constant (K

Indexed as

Amino Acid SequenceChromatography, High Pressure LiquidChromatography, Ion ExchangeCrystallography, X-RayElectrophoresis, Polyacrylamide GelElectrophoretic Mobility Shift AssayHumansProtein ConformationRNARNA-Binding ProteinsSequence Homology, Amino AcidSpectrometry, Mass, Electrospray IonizationRNARNA-Binding ProteinsAgo2electrophoresisequilibrium constantprotein-nucleic acid interactionRNA

Identifiers

PMID30461222
PMCPMC6391183
OpenAlexW2901069713

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.