Evidence map›Paper›PMID 30460895›Full record

ArticleeLife2018

The CryoEM structure of the

Piotr Sosnowski, Linas Urnavicius, Andreas Boland, Robert Fagiewicz, Johan Busselez, Gabor Papai, Helgo Schmidt

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Multi-Omics Profiling ofMicroorganisms · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. AAA+ ATPases: structural insertions under the magnifying glass.Current opinion in structural biology · 2021
    Review
  13. Long-range intramolecular allostery and regulation in the dynein-like AAA protein Mdn1.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  14. Article
  15. Insights into the mechanism and regulation of the CbbQO-type Rubisco activase, a MoxR AAA+ ATPase.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  16. Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Piotr Sosnowski *Institut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.ORCID http://orcid.org/0000-0003-4902-9560
Linas Urnavicius *Division of Structural Studies, MRC Laboratory of Molecular Biology, Cambridge, United Kingdom.
Andreas BolandDivision of Structural Studies, MRC Laboratory of Molecular Biology, Cambridge, United Kingdom.ORCID http://orcid.org/0000-0003-1218-6714
Robert FagiewiczInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.
Johan BusselezInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.ORCID http://orcid.org/0000-0002-4078-1265
Gabor PapaiInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.
Helgo SchmidtInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.ORCID http://orcid.org/0000-0002-8004-8316
Centre National de la Recherche Scientifique · FRMRC Laboratory of Molecular Biology · GB

Funding

Medical Research Council MC_UP_1201/6Medical Research Council MC_UP_A025_1011
6 · The paper itself

Abstract

The biogenesis of 60S ribosomal subunits is initiated in the nucleus where rRNAs and proteins form pre-60S particles. These pre-60S particles mature by transiently interacting with various assembly factors. The ~5000 amino-acid AAA+ ATPase Rea1 (or Midasin) generates force to mechanically remove assembly factors from pre-60S particles, which promotes their export to the cytosol. Here we present three Rea1 cryoEM structures. We visualise the Rea1 engine, a hexameric ring of AAA+ domains, and identify an α-helical bundle of AAA2 as a major ATPase activity regulator. The α-helical bundle interferes with nucleotide-induced conformational changes that create a docking site for the substrate binding MIDAS domain on the AAA +ring. Furthermore, we reveal the architecture of the Rea1 linker, which is involved in force generation and extends from the AAA+ ring. The data presented here provide insights into the mechanism of one of the most complex ribosome maturation factors.

Indexed as

Adenosine DiphosphateAdenosine TriphosphateATPases Associated with Diverse Cellular ActivitiesBinding SitesBiomechanical PhenomenaCloning, MolecularCryoelectron MicroscopyGene ExpressionGenetic VectorsKineticsModels, MolecularOrganelle BiogenesisProtein BindingProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandProtein Interaction Domains and MotifsAdenosine DiphosphateAdenosine TriphosphateATPases Associated with Diverse Cellular ActivitiesMDN1 protein, S cerevisiaeRecombinant ProteinsRibosomal ProteinsRNA, FungalRNA, RibosomalRsa4 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsAAA+ proteinCryoEMmidasinmolecular biophysicsmolecular machineRea1ribosome maturationS. cerevisiaestructural biology

Identifiers

PMID30460895
PMCPMC6286127
OpenAlexW2901258541

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.