Evidence map›Paper›PMID 30460497›Full record

ArticleMycorrhiza2019

Tracing Rhizophagus irregularis isolate IR27 in Ziziphus mauritiana roots under field conditions.

Babacar Thioye, Diederik van Tuinen, Aboubacry Kane, Sergio Mania de Faria, Cheikh Ndiaye, Robin Duponnois, Samba Ndao Sylla, Amadou Mustapha Bâ

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Article in Mycorrhiza, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Babacar ThioyeLaboratoire Commun de Microbiologie IRD/ISRA/UCAD, BP 1386, Dakar, Senegal. babacarthioye@yahoo.fr.
Diederik van TuinenAgroécologie, AgroSup Dijon, CNRS, INRA, Université Bourgogne Franche-Comté, F-21000, Dijon, France.
Aboubacry KaneLaboratoire Commun de Microbiologie IRD/ISRA/UCAD, BP 1386, Dakar, Senegal.
Sergio Mania de FariaEmbrapa Agrobiologia, Km 7 BR 465, Seropedica, Rio de Janeiro, 23890 000, Brazil.
Cheikh NdiayeLaboratoire Commun de Microbiologie IRD/ISRA/UCAD, BP 1386, Dakar, Senegal.
Robin DuponnoisLaboratoire des Symbioses Tropicales et Méditerranéennes UMR113 INRA/AGRO-M/CIRAD/IRD/UM2-TA10/J, Campus International de Baillarguet, 34398, Montpellier, France.
Samba Ndao SyllaLaboratoire Commun de Microbiologie IRD/ISRA/UCAD, BP 1386, Dakar, Senegal.
Amadou Mustapha BâLaboratoire des Symbioses Tropicales et Méditerranéennes UMR113 INRA/AGRO-M/CIRAD/IRD/UM2-TA10/J, Campus International de Baillarguet, 34398, Montpellier, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arbuscular mycorrhizal fungi (AMF) play a major role as biofertilizer for sustainable agriculture. Nevertheless, it is still poorly documented whether inoculated AMF can successfully establish in field soils as exotic AMF and improve plant growth and productivity. Further, the fate of an exogenous inoculum is still poorly understood. Here, we pre-inoculated two cultivars (Tasset and Gola) of the fruit tree Ziziphus mauritiana (jujube) with the exotic AM fungus Rhizophagus irregularis isolate IR27 before transplantation in the field. In two experiments, tracking and quantification of R. irregularis IR27 were assessed in a 13-month-old jujube and an 18-month-old jujube in two fields located in Senegal. Our results showed that the inoculant R. irregularis IR27 was quantitatively traced and discriminated from native R. irregularis isolates in roots by using a qPCR assay targeting a fragment of the RNA polymerase II gene (RPB1), and that the inoculum represented only fractions ranging from 11 to 15% of the Rhizophagus genus in the two plantations 13 and 18 months after transplantation, respectively. This study validates the use of the RPB1 gene as marker for a relative quantification of a mycorrhizal inoculant fungus isolate in the field.

Indexed as

Amino Acid SequenceFungal ProteinsGlomeromycotaMycorrhizaeRNA Polymerase IISenegalSequence AlignmentZiziphusFungal ProteinsRNA Polymerase IIArbuscular mycorrhizal fungiFieldPlantationqPCRRPB1 geneZiziphus mauritiana

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.