Evidence map›Paper›PMID 30460084›Full record

ArticleAnimal cells and systems2018

Gene microarray analysis revealed a potential crucial gene RACK1 in oral squamous cell carcinoma (OSCC).

Jian-Wei Zheng, Yinshen Yang, Shujuan Yang, Wei Zhou, Hongtian Qiu, Xiaoping Li, Qiuyun Cai, Ting Li, Gang Luo

Open access · goldAbstract read
In one paragraph

Article in Animal cells and systems, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 7 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Jian-Wei ZhengShenzhen Stomatological Hospital, Southern Medical University, Shenzhen, People's Republic of China.
Yinshen YangKey Laboratory of Oral Medicine, Guangzhou Institute of Oral Disease, Stomatology Hospital of Guangzhou Medical University, Guangzhou, People's Republic of China.
Shujuan YangDepartment of Public Health and Social and Behavioral Sciences, West China School of Public Health, Sichuan University, Chengdu, People's Republic of China.
Wei ZhouShenzhen Stomatological Hospital, Southern Medical University, Shenzhen, People's Republic of China.
Hongtian QiuShenzhen Stomatological Hospital, Southern Medical University, Shenzhen, People's Republic of China.
Xiaoping LiShenzhen Stomatological Hospital, Southern Medical University, Shenzhen, People's Republic of China.
Qiuyun CaiShenzhen Stomatological Hospital, Southern Medical University, Shenzhen, People's Republic of China.
Ting LiShenzhen Stomatological Hospital, Southern Medical University, Shenzhen, People's Republic of China.
Gang LuoKey Laboratory of Oral Medicine, Guangzhou Institute of Oral Disease, Stomatology Hospital of Guangzhou Medical University, Guangzhou, People's Republic of China.
Southern Medical University Shenzhen Hospital · CNGuangzhou Medical University · CNSichuan University · CNStomatology Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oral squamous cell carcinoma (OSCC) is the sixth most common cancer worldwide, which appears as a consequence of multiple molecular genetic events in various chromosomes and genes. In order to unveil the possible mechanisms underlying OSCC tumorigenesis, the OSCC-related gene expression variance and the gene interaction network should be further investigated. Herein, we conducted the NimbleGen Human Gene Expression Microarray to analyze expression heterogeneity between OSCC primary tumor tissue and its adjacent normal tissue from two patients. A total number of 7872 out of 32,448 detected genes are differentially expressed in OSCC. Gene ontology (GO) analysis demonstrated that these differentially expressed transcripts were critical in a series of metabolic processes, cancer-related signal pathways, and biological regulations. KEGG signaling pathway enrichment suggested a number of pathways (metabolic process and immune response) which are frequently enrolled during cancer progression. 15 most differential regulated genes between OSCC tumor and non-tumor were confirmed by quantitative reverse transcription polymerase chain reaction (qRT-PCR). Furthermore, the interaction network analysis of these confirmed genes by STRING database showed the two subunits of RACK1 had direct interaction with 14 differential proteins. This bioinformatics research lends support about the critical role of RACK1 which functions as a key node protein driving OSCC development.

Indexed as

gene microarraygene profileOSCCRACK1

Identifiers

PMID30460084
PMCPMC6138313
OpenAlexW2794087334

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.