Evidence map›Paper›PMID 30459449›Full record

ArticleScientific reports2018

Expression of the POTE gene family in human ovarian cancer.

Carter J Barger, Wa Zhang, Ashok Sharma, Linda Chee, Smitha R James, Christina N Kufel, Austin Miller, Jane Meza, Ronny Drapkin, Kunle Odunsi and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
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  4. Review
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  8. Article
  9. Review
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  11. Article
  12. Nucleic acid vaccination strategies for ovarian cancer.Frontiers in bioengineering and biotechnology · 2022
    Review
  13. Review
  14. Article
  15. Journal of integrative bioinformatics · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Molecular cancer research : MCR · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Carter J BargerEppley Institute for Cancer Research, University of Nebraska Medical Center, Omaha, NE, 68198-6805, USA.
Wa ZhangEppley Institute for Cancer Research, University of Nebraska Medical Center, Omaha, NE, 68198-6805, USA.
Ashok SharmaEppley Institute for Cancer Research, University of Nebraska Medical Center, Omaha, NE, 68198-6805, USA.ORCID http://orcid.org/0000-0001-7505-6023
Linda CheeEppley Institute for Cancer Research, University of Nebraska Medical Center, Omaha, NE, 68198-6805, USA.
Smitha R JamesDepartment of Pharmacology and Therapeutics, Roswell Park Comprehensive Cancer Center, Buffalo, NY, 14263, USA.
Christina N KufelDepartment of Pharmacology and Therapeutics, Roswell Park Comprehensive Cancer Center, Buffalo, NY, 14263, USA.
Austin MillerDepartment of Biostatistics, Roswell Park Comprehensive Cancer Center, Buffalo, NY, 14263, USA.ORCID http://orcid.org/0000-0001-9739-8462
Jane MezaDepartment of Biostatistics, University of Nebraska Medical Center, Omaha, NE, 68198-4375, USA.
Ronny DrapkinPenn Ovarian Cancer Research Center, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA.ORCID http://orcid.org/0000-0002-6912-6977
Kunle OdunsiDepartment of Immunology, Roswell Park Comprehensive Cancer Center, Buffalo, NY, 14263, USA.
David KlinkebielFred & Pamela Buffett Cancer Center, University of Nebraska Medical Center, Omaha, NE, 68198-6805, USA.
Adam R KarpfEppley Institute for Cancer Research, University of Nebraska Medical Center, Omaha, NE, 68198-6805, USA. adam.karpf@unmc.edu.
University of Nebraska Medical Center · USRoswell Park Comprehensive Cancer Center · USCancer Research Center · US

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Apar Kishor Ganti · 1985 to 2026
$55.0M
CHEMICAL CARCINOGENESIS &CANCER BIOLOGYT32CA009476 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Jennifer D. Black · 1988 to 2026
$6.2M
Epigenetic regulation of cancer/germ-line antigen gene expressionR01CA116674 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI KARPF, ADAM R. · 2006 to 2010
$1.4M
FOXM1-RHNO1 Oncogenic Axis in Ovarian CancerF99CA212470 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI BARGER, CARTER J · 2016 to 2017
$65k
NCI NIH HHS F99 CA212470NCI NIH HHS P30 CA016056NCI NIH HHS P30 CA036727NCI NIH HHS R01 CA116674NCI NIH HHS T32 CA009476U.S. Department of Health & Human Services | National Institutes of Health (NIH) F99CA212470U.S. Department of Health & Human Services | National Institutes of Health (NIH) P30CA016056U.S. Department of Health & Human Services | National Institutes of Health (NIH) P30CA036727U.S. Department of Health & Human Services | National Institutes of Health (NIH) RO1CA116674U.S. Department of Health & Human Services | National Institutes of Health (NIH) T32CA009476
6 · The paper itself

Abstract

The POTE family includes 14 genes in three phylogenetic groups. We determined POTE mRNA expression in normal tissues, epithelial ovarian and high-grade serous ovarian cancer (EOC, HGSC), and pan-cancer, and determined the relationship of POTE expression to ovarian cancer clinicopathology. Groups 1 & 2 POTEs showed testis-specific expression in normal tissues, consistent with assignment as cancer-testis antigens (CTAs), while Group 3 POTEs were expressed in several normal tissues, indicating they are not CTAs. Pan-POTE and individual POTEs showed significantly elevated expression in EOC and HGSC compared to normal controls. Pan-POTE correlated with increased stage, grade, and the HGSC subtype. Select individual POTEs showed increased expression in recurrent HGSC, and POTEE specifically associated with reduced HGSC OS. Consistent with tumors, EOC cell lines had significantly elevated Pan-POTE compared to OSE and FTE cells. Notably, Group 1 & 2 POTEs (POTEs A/B/B2/C/D), Group 3 POTE-actin genes (POTEs E/F/I/J/KP), and other Group 3 POTEs (POTEs G/H/M) show within-group correlated expression, and pan-cancer analyses of tumors and cell lines confirmed this relationship. Based on their restricted expression in normal tissues and increased expression and association with poor prognosis in ovarian cancer, POTEs are potential oncogenes and therapeutic targets in this malignancy.

Indexed as

Antigens, NeoplasmApoptosis Regulatory ProteinsCell Line, TumorFemaleGene Expression Regulation, NeoplasticHumansMultigene FamilyOvarian NeoplasmsSurvival AnalysisAntigens, NeoplasmApoptosis Regulatory ProteinsPOTEB protein, humanPOTEE protein, human

Identifiers

PMID30459449
PMCPMC6244393
OpenAlexW2901521797

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.