Evidence map›Paper›PMID 30459266›Full record

ArticlePlant physiology2019

A Synthetic Oxygen Sensor for Plants Based on Animal Hypoxia Signaling.

Sergio Iacopino, Sandro Jurinovich, Lorenzo Cupellini, Luca Piccinini, Francesco Cardarelli, Pierdomenico Perata, Benedetta Mennucci, Beatrice Giuntoli, Francesco Licausi

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Target of rapamycin signaling couples energy to oxygen sensing to modulate hypoxic gene expression inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Synthetic biology of hypoxia.The New phytologist · 2021
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Sergio IacopinoInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa 56127, Italy.ORCID 0000-0003-2832-3437
Sandro JurinovichChemistry Department, Università di Pisa, Pisa 56124, Italy.
Lorenzo CupelliniChemistry Department, Università di Pisa, Pisa 56124, Italy.ORCID 0000-0003-0848-2908
Luca PiccininiInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa 56127, Italy.ORCID 0000-0002-5529-4160
Francesco CardarelliNational Enterprise for nanoScience and nanoTechnology, Scuola Normale Superiore, Pisa 56126, Italy.
Pierdomenico PerataInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa 56127, Italy.ORCID 0000-0001-9444-0610
Benedetta MennucciChemistry Department, Università di Pisa, Pisa 56124, Italy.
Beatrice GiuntoliInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa 56127, Italy.ORCID 0000-0003-4968-4071
Francesco LicausiInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa 56127, Italy francesco.licausi@unipi.it.ORCID 0000-0003-4769-441X
University of Pisa · ITScuola Superiore Sant'Anna · ITNational Enterprise for NanoScience and NanoTechnology · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Due to the involvement of oxygen in many essential metabolic reactions, all living organisms have developed molecular systems that allow adaptive physiological and metabolic transitions depending on oxygen availability. In mammals, the expression of hypoxia-response genes is controlled by the heterodimeric Hypoxia-Inducible Factor. The activity of this transcriptional regulator is linked mainly to the oxygen-dependent hydroxylation of conserved proline residues in its α-subunit, carried out by prolyl-hydroxylases, and subsequent ubiquitination via the E3 ligase von Hippel-Lindau tumor suppressor, which targets Hypoxia-Inducible Factor-α to the proteasome. By exploiting bioengineered versions of this mammalian oxygen sensor, we designed and optimized a synthetic device that drives gene expression in an oxygen-dependent fashion in plants. Transient assays in Arabidopsis (

Indexed as

AnimalsArabidopsisBiosensing TechniquesCell HypoxiaGene Expression Regulation, PlantGenetic EngineeringHydroxylationOxygenSignal TransductionSynthetic BiologyTranscription FactorsOxygenTranscription Factors

Identifiers

PMID30459266
PMCPMC6393790
OpenAlexW2901683938

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.