Evidence map›Paper›PMID 30458719›Full record

ArticleBMC medical genetics2018

A novel compound heterozygous mutation in VARS2 in a newborn with mitochondrial cardiomyopathy: a case report of a Chinese family.

Keze Ma, Mingyu Xie, Xiaoguang He, Guojun Liu, Xiaomei Lu, Qi Peng, Baimao Zhong, Ning Li

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC medical genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  6. World journal of clinical cases · 2022
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  8. Anticancer activity ofF1000Research · 2022
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  9. Review
  10. Article
  11. Cardiomyopathies in China: A 2018-2019 state-of-the-art review.Chronic diseases and translational medicine · 2020
    Review
  12. Article
  13. Article
  14. The mitochondrial tRNAExperimental and therapeutic medicine · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Keze MaDepartment of Neonatal Intensive Care Unit, Dongguan Children's Hospital, Dongguan, 523325, Guangdong, China.
Mingyu XieDepartment of Neonatal Intensive Care Unit, Dongguan Children's Hospital, Dongguan, 523325, Guangdong, China.
Xiaoguang HeDepartment of Neonatal Intensive Care Unit, Dongguan Children's Hospital, Dongguan, 523325, Guangdong, China.
Guojun LiuDepartment of Neonatal Intensive Care Unit, Dongguan Children's Hospital, Dongguan, 523325, Guangdong, China.
Xiaomei LuDepartment of Medical and Molecular Genetics, Dongguan Institute of Pediatrics, Dongguan, 523325, Guangdong, China.
Qi PengDepartment of Medical and Molecular Genetics, Dongguan Institute of Pediatrics, Dongguan, 523325, Guangdong, China.
Baimao ZhongDepartment of Neonatal Intensive Care Unit, Dongguan Children's Hospital, Dongguan, 523325, Guangdong, China. zbomao@163.com.
Ning LiDepartment of Neonatal Intensive Care Unit, Dongguan Children's Hospital, Dongguan, 523325, Guangdong, China. mean163@163.com.ORCID 0000-0003-4768-9098
Dongguan People’s Hospital · CNGuangdong Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGenetic defects in the mitochondrial aminoacyl-tRNA synthetase are important causes of mitochondrial disorders. VARS2 is one of the genes encoding aminoacyl-tRNA synthetases. Recently, an increasing number of pathogenic variants of VARS2 have been reported. CASE PRESENTATION: We report the novel compound heterozygous pathogenic VARS2 mutations c.643 C > T (p. His215Tyr) and c.1354 A > G (p. Met452Val) in a female infant who presented with poor sucking at birth, poor activity, hyporeflexia, hypertonia, persistent pulmonary hypertension of newborn (PPHN), metabolic acidosis, severe lactic acidosis, expansion and hypertrophic cardiomyopathy. These heterozygous mutations were carried individually by the proband's parents and elder sister; the two mutations segregated in the family and were the cause of the disease in the proband.The c.643 C > T (p. His215Tyr) mutation was not described in the ExaC, GNomAD and 1000 Genomes Project databases, and the frequency of c.1354 A > G (p. Met452Val) was < 0.001 in these gene databases.The two mutated amino acids were located in a highly conserved region of the VARS2 protein that is important for its interaction with the cognate tRNA. The two missense mutations were predicted by online tools to be damaging and deleterious.

conclusionsOur report expands the spectrum of known pathogenicVARS2 variants associated with mitochondrial disorders in humans.VARS2 deficiency may cause a severe neonatal presentation with structural cardiac abnormalities.

Indexed as

Mutation, MissenseAcidosis, LacticAdultAllelesCardiomyopathy, HypertrophicChild, PreschoolFatal OutcomeFemaleGene ExpressionGene FrequencyHeart ArrestHeterozygoteHLA AntigensHumansInfant, NewbornMaleHLA AntigensValine-tRNA LigaseVARS2 protein, humanCardiomyopathyMitochondrial disordersNeonateVARS2

Identifiers

PMID30458719
PMCPMC6247698
OpenAlexW2901698539

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.