Evidence map›Paper›PMID 30458716›Full record

ArticleBMC plant biology2018

Disruption of ureide degradation affects plant growth and development during and after transition from vegetative to reproductive stages.

Hiroshi Takagi, Shunsuke Watanabe, Shoma Tanaka, Takakazu Matsuura, Izumi C Mori, Takashi Hirayama, Hiroshi Shimada, Atsushi Sakamoto

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 48 citations in OpenAlex.

  1. Loss ofPlants (Basel, Switzerland) · 2026
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  13. Interactive effects of polyamines and arbuscular mycorrhiza in modulating plant biomass, NEnvironmental science and pollution research international · 2020
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Hiroshi TakagiGraduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, 739-8526, Japan. htakagi@umn.edu.ORCID http://orcid.org/0000-0003-0321-0284
Shunsuke WatanabeGraduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, 739-8526, Japan.
Shoma TanakaGraduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, 739-8526, Japan.
Takakazu MatsuuraInstitute of Plant Science and Resources, Okayama University, Kurashiki, 710-0046, Japan.
Izumi C MoriInstitute of Plant Science and Resources, Okayama University, Kurashiki, 710-0046, Japan.
Takashi HirayamaInstitute of Plant Science and Resources, Okayama University, Kurashiki, 710-0046, Japan.
Hiroshi ShimadaGraduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, 739-8526, Japan.
Atsushi SakamotoGraduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, 739-8526, Japan. ahkkao@hiroshima-u.ac.jp.
Hiroshima University · JPOkayama University · JP

Funding

Japan Society for the Promotion of Science 26440147Japan Society for the Promotion of Science 26-5367Ministry of Education, Culture, Sports, Science and Technology 25119717
6 · The paper itself

Abstract

backgroundThe ureides allantoin and allantoate are major metabolic intermediates of purine catabolism with high nitrogen-to-carbon ratios. Ureides play a key role in nitrogen utilization in ureide-type legumes, but their effects on growth and development in non-legume plants are poorly understood. Here, we examined the effects of knocking out genes encoding ureide-degrading enzymes, allantoinase (ALN) and allantoate amidohydrolase (AAH), on the vegetative-to-reproductive transition and subsequent growth of Arabidopsis plants.

resultsThe ureide-degradation mutants (aln and aah) showed symptoms similar to those of nitrogen deficiency: early flowering, reduced size at maturity, and decreased fertility. Consistent with these phenotypes, carbon-to-nitrogen ratios and nitrogen-use efficiencies were significantly decreased in ureide-degradation mutants; however, adding nitrogen to irrigation water did not alleviate the reduced growth of these mutants. In addition to nitrogen status, levels of indole-3-acetic acid and gibberellin in five-week-old plants were also affected by the aln mutations. To test the possibility that ureides are remobilized from source to sink organs, we measured ureide levels in various organs. In wild-type plants, allantoate accumulated predominantly in inflorescence stems and siliques; this accumulation was augmented by disruption of its catabolism. Mutants lacking ureide transporters, ureide permeases 1 and 2 (UPS1 and UPS2), exhibited phenotypes similar to those of the ureide-degradation mutants, but had decreased allantoate levels in the reproductive organs. Transcript analysis in wild-type plants suggested that genes involved in allantoate synthesis and ureide transport were coordinately upregulated in senescing leaves.

conclusionsThis study demonstrates that ureide degradation plays an important role in supporting healthy growth and development in non-legume Arabidopsis during and after transition from vegetative to reproductive stages.

Indexed as

AllantoinAmidohydrolasesArabidopsisArabidopsis ProteinsMutationNitrogenUreohydrolasesallantoate amidohydrolaseAllantoinallantoinaseAmidohydrolasesArabidopsis ProteinsNitrogenUreohydrolasesAllantoateAllantoinArabidopsis thalianaCatabolic pathwayNitrogen remobilizationPhytohormonePurine baseUreide transport

Identifiers

PMID30458716
PMCPMC6245725
OpenAlexW2901039008

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.