Evidence map›Paper›PMID 30458018›Full record

ArticlePloS one2018

Lysine at position 329 within a C-terminal dilysine motif is crucial for the ER localization of human SLC35B4.

Bożena Bazan, Maciej Wiktor, Dorota Maszczak-Seneczko, Teresa Olczak, Beata Kaczmarek, Mariusz Olczak

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Novel Insights into Selected Disease-Causing Mutations within theInternational journal of molecular sciences · 2020
    Article
  7. Biosynthesis of GlcNAc-richThe Journal of biological chemistry · 2020
    Article
  8. Article
  9. Article
  10. Nucleotide Sugar Transporter SLC35 Family Structure and Function.Computational and structural biotechnology journal · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Bożena BazanFaculty of Biotechnology, University of Wrocław, Wrocław, Poland.
Maciej WiktorFaculty of Biotechnology, University of Wrocław, Wrocław, Poland.
Dorota Maszczak-SeneczkoFaculty of Biotechnology, University of Wrocław, Wrocław, Poland.
Teresa OlczakFaculty of Biotechnology, University of Wrocław, Wrocław, Poland.
Beata KaczmarekFaculty of Biotechnology, University of Wrocław, Wrocław, Poland.
Mariusz OlczakFaculty of Biotechnology, University of Wrocław, Wrocław, Poland.ORCID 0000-0001-8629-6364
University of Wrocław · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SLC35B4 belongs to the solute carrier 35 (SLC35) family whose best-characterized members display a nucleotide sugar transporting activity. Using an experimental model of HepG2 cells and indirect immunofluorescent staining, we verified that SLC35B4 was localized to the endoplasmic reticulum (ER). We demonstrated that dilysine motif, especially lysine at position 329, is crucial for the ER localization of this protein in human cells and therefore one should use protein C-tagging with caution. To verify the importance of the protein in glycoconjugates synthesis, we generated SLC35B4-deficient HepG2 cell line using CRISPR-Cas9 approach. Our data showed that knock-out of the SLC35B4 gene does not affect major UDP-Xyl- and UDP-GlcNAc-dependent glycosylation pathways.

Indexed as

Amino Acid MotifsAmino Acid SequenceCRISPR-Cas SystemsDipeptidesEndoplasmic ReticulumGlucosamineGlycosylationGolgi ApparatusHep G2 CellsHumansLysineNucleotide Transport ProteinsSignal TransductionUridine Diphosphate SugarsDipeptidesGlucosamineLysinelysyllysineNucleotide Transport ProteinsSLC35B4 protein, humanUDP-2-acetamido-2-deoxyxyloseUDP-glucosamineUridine Diphosphate Sugars

Identifiers

PMID30458018
PMCPMC6245738
OpenAlexW2901276179

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.