Evidence map›Paper›PMID 30455043›Full record

ArticleBiophysical journal2018

Tissue Flow Induces Cell Shape Changes During Organogenesis.

Gonca Erdemci-Tandogan, Madeline J Clark, Jeffrey D Amack, M Lisa Manning

Abstract read
In one paragraph

Article in Biophysical journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Shape, Strain, and Stability: Epithelia Under High Strain.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Dynamic forces drive cell and organ morphology changes during embryonic development.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Article
  12. Configurational fingerprints of multicellular living systems.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Gonca Erdemci-TandoganDepartment of Physics, Syracuse University, Syracuse, New York. Electronic address: gerdemci@syr.edu.
Madeline J ClarkDepartment of Cell and Developmental Biology, State University of New York, Upstate Medical University, Syracuse, New York.
Jeffrey D AmackDepartment of Cell and Developmental Biology, State University of New York, Upstate Medical University, Syracuse, New York.
M Lisa ManningDepartment of Physics, Syracuse University, Syracuse, New York.

Funding

Quantitative Modeling of Cell Shape Changes During OrganogenesisR01GM117598 · NIGMS · SYRACUSE UNIVERSITY · PI MANNING, MARY ELIZABETH LISA · 2015 to 2018
$1.0M
NIGMS NIH HHS R01 GM117598
6 · The paper itself

Abstract

In embryonic development, cell shape changes are essential for building functional organs, but in many cases, the mechanisms that precisely regulate these changes remain unknown. We propose that fluid-like drag forces generated by the motion of an organ through surrounding tissue could generate changes to its structure that are important for its function. To test this hypothesis, we study the zebrafish left-right organizer, Kupffer's vesicle (KV), using experiments and mathematical modeling. During development, monociliated cells that comprise KV undergo region-specific shape changes along the anterior-posterior axis that are critical for KV function: anterior cells become long and thin, whereas posterior cells become short and squat. Here, we develop a mathematical vertex-like model for cell shapes that incorporates both tissue rheology and cell motility and constrain the model parameters using previously published rheological data for the zebrafish tailbud as well as our own measurements of the KV speed. We find that drag forces due to dynamics of cells surrounding KV could be sufficient or work in concert with previously identified mechanisms to drive KV cell shape changes during KV development. More broadly, these results suggest that cell shape changes during embryonic development and beyond could be driven by dynamic forces not typically considered in models or experiments.

Indexed as

Cell ShapeEmbryonic DevelopmentOrganogenesisAnimalsBody PatterningCiliaEmbryo, NonmammalianKupffer CellsModels, TheoreticalZebrafishZebrafish ProteinsZebrafish Proteins

Identifiers

PMID30455043
PMCPMC6289824

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.