Evidence map›Paper›PMID 30454649›Full record

ArticleCell2018

Changes of Cell Biochemical States Are Revealed in Protein Homomeric Complex Dynamics.

Bram Stynen, Diala Abd-Rabbo, Jacqueline Kowarzyk, Leonor Miller-Fleming, Simran Kaur Aulakh, Philippe Garneau, Markus Ralser, Stephen W Michnick

Open access · hybridFull text read
In one paragraph

Article in Cell, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Tissue Iron Predicts Metformin Responsiveness in a Mouse Model and in Humans with Type 2 Diabetes.Diabetes, metabolic syndrome and obesity : targets and therapy · 2026
    Article
  5. Article
  6. The direct targets of metformin in diabetes and beyond.Trends in endocrinology and metabolism: TEM · 2025
    Review
  7. Three decades of protein-fragment complementation.Nature reviews. Molecular cell biology · 2025
    Article
  8. Review
  9. Review
  10. Review
  11. Iron and the Pathophysiology of Diabetes.Annual review of physiology · 2023
    Review
  12. Review
  13. Review
  14. Endocytic proteins with prion-like domains form viscoelastic condensates that enable membrane remodeling.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Functional genomics and metabolomics advance the ethnobotany of the Samoan traditional medicine "matalafi".Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Article
  17. Review
  18. Metformin induces Ferroptosis by inhibiting UFMylation of SLC7A11 in breast cancer.Journal of experimental & clinical cancer research : CR · 2021
    Article
  19. Pharmacological treatment of hyperglycemia in type 2 diabetes.The Journal of clinical investigation · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Bram StynenDépartement de Biochimie, Université de Montréal, C.P. 6128, Succursale Centre-ville, Montréal, QC H3C 3J7, Canada.
Diala Abd-RabboDépartement de Biochimie, Université de Montréal, C.P. 6128, Succursale Centre-ville, Montréal, QC H3C 3J7, Canada; Centre Robert-Cedergren, Bio-Informatique et Génomique, Université de Montréal, C.P. 6128, Succursale centre-ville, Montréal, QC H3C 3J7, Canada.
Jacqueline KowarzykDépartement de Biochimie, Université de Montréal, C.P. 6128, Succursale Centre-ville, Montréal, QC H3C 3J7, Canada.
Leonor Miller-FlemingDepartment of Biochemistry, University of Cambridge, 80 Tennis Court Road, Cambridge CB2 1GA, UK.
Simran Kaur AulakhMolecular Biology of Metabolism Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Philippe GarneauDépartement de Biochimie, Université de Montréal, C.P. 6128, Succursale Centre-ville, Montréal, QC H3C 3J7, Canada.
Markus RalserDepartment of Biochemistry, University of Cambridge, 80 Tennis Court Road, Cambridge CB2 1GA, UK; Molecular Biology of Metabolism Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK; Department of Biochemistry, Charité University Medicine, Berlin, Germany.
Stephen W MichnickDépartement de Biochimie, Université de Montréal, C.P. 6128, Succursale Centre-ville, Montréal, QC H3C 3J7, Canada; Centre Robert-Cedergren, Bio-Informatique et Génomique, Université de Montréal, C.P. 6128, Succursale centre-ville, Montréal, QC H3C 3J7, Canada. Electronic address: stephen.michnick@umontreal.ca.
Université de Montréal · CACharité - Universitätsmedizin Berlin · DEThe Francis Crick Institute · GBUniversity of Cambridge · GB

Funding

Cancer Research UK FC001134Medical Research Council FC001134Wellcome Trust 093735/Z/10/ZWellcome Trust FC001134
6 · The paper itself

Abstract

We report here a simple and global strategy to map out gene functions and target pathways of drugs, toxins, or other small molecules based on "homomer dynamics" protein-fragment complementation assays (hdPCA). hdPCA measures changes in self-association (homomerization) of over 3,500 yeast proteins in yeast grown under different conditions. hdPCA complements genetic interaction measurements while eliminating the confounding effects of gene ablation. We demonstrate that hdPCA accurately predicts the effects of two longevity and health span-affecting drugs, the immunosuppressant rapamycin and the type 2 diabetes drug metformin, on cellular pathways. We also discovered an unsuspected global cellular response to metformin that resembles iron deficiency and includes a change in protein-bound iron levels. This discovery opens a new avenue to investigate molecular mechanisms for the prevention or treatment of diabetes, cancers, and other chronic diseases of aging.

Indexed as

Diabetes Mellitus, Type 2Genetic Complementation TestHumansIronMetalloproteinsMetforminSaccharomyces cerevisiaeSirolimusIronMetalloproteinsMetforminSirolimusagingiron homeostasislarge-scale screenmetforminprotein-protein interactionsrapamycin

Identifiers

PMID30454649
PMCPMC6242466
OpenAlexW2898397748

What OpenQuestion holds

Textfull text, public
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.