Evidence map›Paper›PMID 30454056›Full record

ArticleMicrobial cell factories2018

Exploring the contributions of two glutamate decarboxylase isozymes in Lactobacillus brevis to acid resistance and γ-aminobutyric acid production.

Changjiang Lyu, Weirui Zhao, Chunlong Peng, Sheng Hu, Hui Fang, Yujiao Hua, Shanjing Yao, Jun Huang, Lehe Mei

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed, 1 pooled it
8.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 1 synthesis or guideline pooled it, 115 citations in OpenAlex.

  1. Pooled it
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  8. Isolation and genetic analysis of anBiochemistry and biophysics reports · 2026
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  17. Characterization ofFoods (Basel, Switzerland) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Changjiang LyuSchool of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, 310023, China.
Weirui ZhaoSchool of Biotechnology and Chemical Engineering, Ningbo Institute of Technology, Zhejiang University, Ningbo, 315100, China.
Chunlong PengCollege of Chemical and Biological Engineering, Zhejiang University, Hangzhou, 310027, China.
Sheng HuSchool of Biotechnology and Chemical Engineering, Ningbo Institute of Technology, Zhejiang University, Ningbo, 315100, China.
Hui FangSchool of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, 310023, China.
Yujiao HuaSchool of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, 310023, China.
Shanjing YaoCollege of Chemical and Biological Engineering, Zhejiang University, Hangzhou, 310027, China.
Jun HuangSchool of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, 310023, China. huangjun@zust.edu.cn.
Lehe MeiCollege of Chemical and Biological Engineering, Zhejiang University, Hangzhou, 310027, China. meilh@zju.edu.cn.
Ningbo University of Technology · CNZhejiang University · CNZhejiang University of Science and Technology · CN

Funding

National Natural Science Foundation of China 21176220National Natural Science Foundation of China 31470793National Natural Science Foundation of China 31670804Natural Science Foundation of Zhejiang Province LQ18B060002Natural Science Foundation of Zhejiang Province Z13B060008
6 · The paper itself

Abstract

backgroundThe glutamate decarboxylase (GAD) system of Lactobacillus brevis involves two isoforms of GAD, GadA and GadB, which catalyze the conversion of L-glutamate to γ-aminobutyric acid (GABA) in a proton-consuming reaction contributing to intracellular pH homeostasis. However, direct experimental evidence for detailed contributions of gad genes to acid tolerance and GABA production is lacking.

resultsMolecular analysis revealed that gadB is cotranscribed in tandem with upstream gadC, and that expression of gadCB is greatly upregulated in response to low ambient pH when cells enter the late exponential growth phase. In contrast, gadA is located away from the other gad genes, and its expression was consistently lower and not induced by mild acid treatment. Analysis of deletion mutations in the gad genes of L. brevis demonstrated a decrease in the level of GAD activity and a concomitant decrease in acid resistance in the order of wild-type> ΔgadA> ΔgadB> ΔgadC> ΔgadAB, indicating that the GAD activity mainly endowed by GadB rather than GadA is an indispensable step in the GadCB mediated acid resistance of this organism. Moreover, engineered strains with higher GAD activities were constructed by overexpressing key GAD system genes. With the proposed two-stage pH and temperature control fed-batch fermentation strategy, GABA production by the engineered strain L. brevis 9530: pNZ8148-gadBC continuously increased reaching a high level of 104.38 ± 3.47 g/L at 72 h.

conclusionsThis is the first report of the detailed contribution of gad genes to acid tolerance and GABA production in L. brevis. Enhanced production of GABA by engineered L. brevis was achieved, and the resulting GABA level was one of the highest among lactic acid bacterial species grown in batch or fed-batch culture.

Indexed as

AcidsFermentationgamma-Aminobutyric AcidGene Expression Regulation, BacterialGenes, BacterialGenetic LociGlutamate DecarboxylaseHydrogen-Ion ConcentrationIsoenzymesLevilactobacillus brevisOperonPhylogenySequence DeletionSubstrate SpecificityTemperatureTime FactorsAcidsgamma-Aminobutyric AcidGlutamate DecarboxylaseIsoenzymesAcid resistanceGABAGAD systemLactobacillus brevis

Identifiers

PMID30454056
PMCPMC6240960
OpenAlexW2901101683

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.