Evidence map›Paper›PMID 30454026›Full record

ArticleClinical epigenetics2018

Loss of DNA methylation is related to increased expression of miR-21 and miR-146b in papillary thyroid carcinoma.

Isabella Maria Dias Payão Ortiz, Mateus Camargo Barros-Filho, Mariana Bisarro Dos Reis, Caroline Moraes Beltrami, Fabio Albuquerque Marchi, Hellen Kuasne, Luísa Matos do Canto, Julia Bette Homem de Mello, Cecilie Abildgaard, Clóvis Antônio Lopes Pinto and 2 more

Abstract read
In one paragraph

Article in Clinical epigenetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. DNA Hypomethylation ofInternational journal of molecular sciences · 2026
    Article
  2. Article
  3. Review
  4. International journal of molecular sciences · 2025
    Article
  5. The role of epigenetic methylations in thyroid Cancer.World journal of surgical oncology · 2024
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. MiR-181a promotes cell proliferation and migration through targeting KLF15 in papillary thyroid cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2022
    Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Hypomethylation CausesMolecular therapy oncolytics · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Isabella Maria Dias Payão OrtizInternational Research Center-CIPE, A.C. Camargo Cancer Center, Taguá Street 440, São Paulo, 01508-010, Brazil.
Mateus Camargo Barros-FilhoInternational Research Center-CIPE, A.C. Camargo Cancer Center, Taguá Street 440, São Paulo, 01508-010, Brazil.
Mariana Bisarro Dos ReisInternational Research Center-CIPE, A.C. Camargo Cancer Center, Taguá Street 440, São Paulo, 01508-010, Brazil.
Caroline Moraes BeltramiInternational Research Center-CIPE, A.C. Camargo Cancer Center, Taguá Street 440, São Paulo, 01508-010, Brazil.
Fabio Albuquerque MarchiInternational Research Center-CIPE, A.C. Camargo Cancer Center, Taguá Street 440, São Paulo, 01508-010, Brazil.
Hellen KuasneInternational Research Center-CIPE, A.C. Camargo Cancer Center, Taguá Street 440, São Paulo, 01508-010, Brazil.
Luísa Matos do CantoInternational Research Center-CIPE, A.C. Camargo Cancer Center, Taguá Street 440, São Paulo, 01508-010, Brazil.
Julia Bette Homem de MelloInternational Research Center-CIPE, A.C. Camargo Cancer Center, Taguá Street 440, São Paulo, 01508-010, Brazil.
Cecilie AbildgaardDepartment of Clinical Genetics, Vejle Hospital, Institute of Regional Health Research, University of Southern Denmark, Beriderbakken 4, 7100, Vejle, Denmark.
Clóvis Antônio Lopes PintoDepartment of Pathology, A.C. Camargo Cancer Center, Professor Antonio Prudente Street 211, São Paulo, 01509-900, Brazil.
Luiz Paulo KowalskiDepartment of Head and Neck Surgery and Otorhinolaryngology, A.C. Camargo Cancer Center, Professor Antonio Prudente Street 211, São Paulo, 01509-900, Brazil.
Silvia Regina RogattoDepartment of Clinical Genetics, Vejle Hospital, Institute of Regional Health Research, University of Southern Denmark, Beriderbakken 4, 7100, Vejle, Denmark. silvia.regina.rogatto@rsyd.dk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDNA methylation in miRNA genes has been reported as a mechanism that may cause dysregulation of mature miRNAs and consequently impact the gene expression. This mechanism is largely unstudied in papillary thyroid carcinomas (PTC).

methodsTo identify differentially methylated miRNA-encoding genes, we performed global methylation analysis (Illumina 450 K), integrative analysis (TCGA database), data confirmation (pyrosequencing and RT-qPCR), and functional assays.

resultsMethylation analysis revealed 27 differentially methylated miRNA genes. The integrative analyses pointed out miR-21 and miR-146b as potentially regulated by methylation (hypomethylation and increased expression). DNA methylation and expression patterns of miR-21 and miR-146b were confirmed as altered, as well as seven of 452 mRNAs targets were down-expressed. The combined methylation and expression levels of miR-21 and miR-146b showed potential to discriminate malignant from benign lesions (91-96% sensitivity and 96-97% specificity). An increased expression of miR-146b due to methylation loss was detected in the TPC1 cell line. The miRNA mimic transfection highlighted putative target mRNAs.

conclusionsThe increased expression of miR-21 and miR-146b due to loss of DNA methylation in PTC resulted in the disruption of the transcription machinery and biological pathways. These miRNAs are potential diagnostic biomarkers, and these findings provide support for future development of targeted therapies.

Indexed as

DNA MethylationUp-RegulationBiomarkers, TumorCell Line, TumorGene Expression Regulation, NeoplasticHumansMicroRNAsReal-Time Polymerase Chain ReactionSensitivity and SpecificitySequence Analysis, DNAThyroid Cancer, PapillaryThyroid NeoplasmsBiomarkers, TumorMicroRNAsMIRN146 microRNA, humanMIRN21 microRNA, humanCarcinomaDNA methylationmicroRNAmiR-146bmiR-21Papillary thyroid

Identifiers

PMID30454026
PMCPMC6245861

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.